Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01123 ATGGATGAAGAATTGGTTGCTGGGCCCACAGAATTAGAGATTGACGAGGATTCAGAGCACCAGGGCAAAGAAGATAGGTATGCGTTAAACACAAAAATCTTAAAATCTCAAGAAATCCCTAGAGCTGTTAAGGGGGAATATGATGAACTCGTACAAGGTAAAATCGTTGCAGAAGCATCACAGCATCCGCATCAAAGCCTTTTTAGGGATGTTGAAGAATTAACTGTGAAAAGTTACAATGGTTCTACTTTGGATATTGGTACATCCAGCAACCGACAGCAGATTTATAATAATAAGCAGAATCGTTGGCTGAATCTTTCTCAGGTAGGGAGCCATTCAGGGCTTGGAAACACTGTCCAGGAGGATGCTGATGCTGCTGGGTCCACATCTTTTGCACAGCTACTAGCTAGAAAATCACTCAGTGATGGTCACACCAATGTTATTGAACGCTTGGAAGATTATGAGAATAAAGAGATTGCAGCTGATGTTCATGGACAAATTCGGACGAAAATTATATCCAATTCTGGATTTGCTGAGTATTTTATTAAAAGTACCTTGAAGGGTAAGGGTATCATATGTAGAGGTCCATCTTCTGATGTCCTCGCCGTTCAGTCTAGAGATAAAAATCAGATGAAGACTGGCACTGATACTGATCAGAAACCGATGAAGACTGCCATTGATATCGGTGAGAATAAGATGAAAGCTGGCATTGGTACAGATCAGTATCAGAAGACTGGCAGCGATAGTCCGTGGAAGTCTACCATATCGGCAAGCTGTGATTCCATAACTGCAAAATGTCCTTCTTATAGTAGTTCTGTGCATAGACCAGGAGGATTTGGCTATGGTGGTGTAACTTTGAGAGAATGGTTGAAATGTGAACAACACAAAGCAAGCAAAGTGGAGTGTTTGAATTTATTTAGAAAGATTGTGGATTTAGTGGATGATTCTCACTCTCAGGGAACTGCATTGAACAACCTATATCCATCTTACATCAAATTATTACCATCAAACCAAGTCTTGCACATCGGGTTACCTATACAAGAGCAGATGTCAGATAGTGTTGTGAATTCTGAAGTTCTTCACTTAAATGAATCTTTAAGTAGTAAAAGGCTGTCAGAGCAAGTAACATTTTCTTCTCATGACATGGTGTCAAAGAAACAAAAATTTAATGAAGGTGTGAGAATATCTGGGAGTGATTCGTGTCTTGAAAATGCTAGTGATAGGAAAGCCCGTACAGTTGGATCACAGGATTATTGCAATGAATATGAAGAGGATATCCAATATTCCAAATATAATATTAGGAGGATGTCTAGCGTCCCTCGCGTATCCATTGCAGGTCAGTCACCGTTATCGTTAGGGGAAAGATTGGAAGAAAAGTGGTATGCAAGTCCTGAGGGGGGATGCACAACATCATCAAATATCTACTGCTTAGGTGTCCTCCTTTTTGAGTTACTTGGCCATTTTGACTCTGAAAGAGCTCGAATTGCAGCAATGTCTGATCTTCAACATAGGATTCTTCCTCCGGTTTTCCTTTCAGAAAATCCTAAGGAAGCTGGCTTTTGTCTCTGGTTGCTGCATCCAGAACCGACATCACGTCCAACAACTAGGGAAATCCTACAATCTGAAGTGATCAATGGATTGCACGAGTTGTATAATGAGGAGTTGTCATCAAATATTGAACAAGATGATGTAGAATCAGAACTGTTACTGCATTTCCTTGCCTCGTTGAAAGAGAAGAGGCAGAAGGATGCCTCCAAATTAGTAGAAGAAATTAAGTGTTTGGAATCAGATATTGAGGAGGTGGAGAGGAGGCATGACTCTTTGGATCTATCTGACTCACAGAATAATTACTCTTGTCAGAGAAAGATTGGAAAGGAACCTTTTAGTTTAGAAATGCTAAACTCAGTATCCATAATGTCCAATTCAAATGATTTAAGATTGTTGAGAAATATGTGTCATCTTGAAAGTGCTTACTTCTCCTTGAGATCCAAAGTTAGGCCCTATGAAACAGATGCTGCAACTCATCCTAATAATAATTTACTAAGATGCCGTGAGAACTGGCATGTGGCACAAAAAGGTGAGGAACATGCTGAAAGGAAAGATTCTTTAGGAACCTTCTTTGATGGTTTGTGCAAGTATGCACGTTATAGCAAGTTTGAAGTGCGGGGTGTACTTAGAAATGCAGATTTTAATAATCCTGCAAATGTAATATGCTCTCTGAGCTTTGATCGTGATGGAGATTACTTTGCTTCCGCTGGAATATCCAAGAAAATAAAAGTCTTTGATTTTAATGCACTTTGCAATGACTCTATTGATATCCATTATCCTGTATTTGAGATGTCAAATGGATCGAAGCTCAGCTGTGTTTGCTGGAATAACTATATCAAGAACTATCTTGCCTCCACAGACTATGATGGTGTAGTGAAGTTATGGGATGCTAGCACAGGTCAAGAGTTCTCTCAGTTAACTGAACATGAGAAAAGGGCATGGTCTGTTGATTTTTCTCCAGTATGCCCGACAAAATTAGCCAGTGGAAGTGATGATTGCTCTGTCAAACTGTGGAACATCAATGAGAGAAACTCTCTAGGCACAATCGGGAATGTTGCTAATGTCTGCTGTGTTCAATTCTCTGCTCATTCTTCTCACTTGCTGGCTTTTGGATCTGCCGATTACTCTACATATTGCTTTGATATTCGCAATCTTAGAAGTCCCTGGTGTGTATTGGCTGGGCATCGTAAAGCCGTGAGCTATGTCAAATTTTTAGACTCTGGAACACTTGTTTCTGCATCTACTGATAATACATTAAAGATCTGGGATCTCAGTAAAACCTCTCCTGTGGTTCCATCTGCCAGTGCTTGCACCCTAACATTGTCAGGGCATACTAATGAGAAGAATTTTGTGGGTTTGTCGGTTGCTGATGGATATATTGCATGTGGTTCAGAAACAAATGAGGTTTACTCCTACTATAAATCGCTTCCCATGCCAATCACTTCGCACAAGTTTGGGTCTATTGATCCCATATCTGGTAAGGATACTGATGATGACAATGGCCAGTTTGTTTCAAGTGTGTGCTGGAAAGGGAATTCGGACATGCTTATTGCAGCAAATTCAAGTGGATGTCTTGGGTTCATCTTGATGAGGAAACTCGGGGTTTCAAACATAATTTCACATCGTCAAATGGGAAAGGCCAGTTAA 3195 0.4025 MDEELVAGPTELEIDEDSEHQGKEDRYALNTKILKSQEIPRAVKGEYDELVQGKIVAEASQHPHQSLFRDVEELTVKSYNGSTLDIGTSSNRQQIYNNKQNRWLNLSQVGSHSGLGNTVQEDADAAGSTSFAQLLARKSLSDGHTNVIERLEDYENKEIAADVHGQIRTKIISNSGFAEYFIKSTLKGKGIICRGPSSDVLAVQSRDKNQMKTGTDTDQKPMKTAIDIGENKMKAGIGTDQYQKTGSDSPWKSTISASCDSITAKCPSYSSSVHRPGGFGYGGVTLREWLKCEQHKASKVECLNLFRKIVDLVDDSHSQGTALNNLYPSYIKLLPSNQVLHIGLPIQEQMSDSVVNSEVLHLNESLSSKRLSEQVTFSSHDMVSKKQKFNEGVRISGSDSCLENASDRKARTVGSQDYCNEYEEDIQYSKYNIRRMSSVPRVSIAGQSPLSLGERLEEKWYASPEGGCTTSSNIYCLGVLLFELLGHFDSERARIAAMSDLQHRILPPVFLSENPKEAGFCLWLLHPEPTSRPTTREILQSEVINGLHELYNEELSSNIEQDDVESELLLHFLASLKEKRQKDASKLVEEIKCLESDIEEVERRHDSLDLSDSQNNYSCQRKIGKEPFSLEMLNSVSIMSNSNDLRLLRNMCHLESAYFSLRSKVRPYETDAATHPNNNLLRCRENWHVAQKGEEHAERKDSLGTFFDGLCKYARYSKFEVRGVLRNADFNNPANVICSLSFDRDGDYFASAGISKKIKVFDFNALCNDSIDIHYPVFEMSNGSKLSCVCWNNYIKNYLASTDYDGVVKLWDASTGQEFSQLTEHEKRAWSVDFSPVCPTKLASGSDDCSVKLWNINERNSLGTIGNVANVCCVQFSAHSSHLLAFGSADYSTYCFDIRNLRSPWCVLAGHRKAVSYVKFLDSGTLVSASTDNTLKIWDLSKTSPVVPSASACTLTLSGHTNEKNFVGLSVADGYIACGSETNEVYSYYKSLPMPITSHKFGSIDPISGKDTDDDNGQFVSSVCWKGNSDMLIAANSSGCLGFILMRKLGVSNIISHRQMGKAS 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01123 1064 Gene3D - 706 1046 IPR015943 GO:0005515
Aip05g01123 1064 ProSiteProfiles Trp-Asp (WD) repeats profile. 779 821 IPR001680 GO:0005515
Aip05g01123 1064 ProSiteProfiles Trp-Asp (WD) repeats profile. 822 864 IPR001680 GO:0005515
Aip05g01123 1064 SUPERFAMILY Protein kinase-like (PK-like) 459 553 IPR011009 -
Aip05g01123 1064 PANTHER PROTEIN SPA1-RELATED 2 58 1042 IPR044630 GO:0009640
Aip05g01123 1064 PANTHER PROTEIN SPA1-RELATED 2 58 1042 - -
Aip05g01123 1064 ProSitePatterns Trp-Asp (WD) repeats signature. 926 940 IPR019775 -
Aip05g01123 1064 PRINTS G protein beta WD-40 repeat signature 842 856 IPR020472 -
Aip05g01123 1064 PRINTS G protein beta WD-40 repeat signature 799 813 IPR020472 -
Aip05g01123 1064 PRINTS G protein beta WD-40 repeat signature 926 940 IPR020472 -
Aip05g01123 1064 ProSitePatterns Trp-Asp (WD) repeats signature. 799 813 IPR019775 -
Aip05g01123 1064 Gene3D Transferase(Phosphotransferase) domain 1 283 553 - -
Aip05g01123 1064 ProSiteProfiles Trp-Asp (WD) repeats profile. 908 948 IPR001680 GO:0005515
Aip05g01123 1064 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 908 941 - -
Aip05g01123 1064 SMART WD40_4 858 897 IPR001680 GO:0005515
Aip05g01123 1064 SMART WD40_4 901 939 IPR001680 GO:0005515
Aip05g01123 1064 SMART WD40_4 773 812 IPR001680 GO:0005515
Aip05g01123 1064 SMART WD40_4 718 762 IPR001680 GO:0005515
Aip05g01123 1064 SMART WD40_4 815 855 IPR001680 GO:0005515
Aip05g01123 1064 SMART WD40_4 950 989 IPR001680 GO:0005515
Aip05g01123 1064 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 822 857 - -
Aip05g01123 1064 MobiDBLite consensus disorder prediction 1 22 - -
Aip05g01123 1064 Pfam WD domain, G-beta repeat 817 855 IPR001680 GO:0005515
Aip05g01123 1064 Pfam WD domain, G-beta repeat 907 939 IPR001680 GO:0005515
Aip05g01123 1064 Coils Coil 577 611 - -
Aip05g01123 1064 ProSitePatterns Trp-Asp (WD) repeats signature. 842 856 IPR019775 -
Aip05g01123 1064 SUPERFAMILY WD40 repeat-like 730 1041 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01123 Aip-Chr5 16168400 16174050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01123 842 985 Miscellaneous Gene Families AT5G08390 30.822 4.56e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01123 K16240 - gmx:100778303 1481.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01123 05 16168400 16174050 Aip03g03070 03 94695057 94700913 PCT