Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03070 ATGGATCAAGAATTGATTAACGAGTCTATGAGATTGGGGGTTGTTGCTGAGGGTTTACAACTCCAAACTAAAGATGAGGAGCTTTCAATAAACCCCGAGAGCAACAAAATAATAAAACCCCAAGTTGACCACAATGACTCCTCCCATATCCCACCCCCAGAATGTAATGACGTTAGACAAGGTACTATGTCACGACTTCAGCATCCAATTCGTCTTTCCAGTGACGCTGATGATATGGTTGAAGAATTGACAGTGAGAAGTTGCAATGGTTCGAGCTTAGATATTGGAACACAGGGCAATCAAGGGCCTGCGTATAATACTCAGAGCCAAATGCAGCTAGCAAGTGATTCAGGAGTTGGAACTTTACTTCTTGGTGATACTGGGTGTAGAAACAGTGACCAAGCTTCCTCAAAAGTTATATCTAGATCAGGATTTGCTGAGTATTTTATTAAAAATACGATAAAGGGAAAGGATATTGTGTGTAAAAATTCATCTTCTATTGGCTTGACTGTTGAGTCTAGAGATCAGAATCTGATGAAGGCTGGCATTGGTACTCAGATGGATTCCAGTGTCCCGCTAAGCCCTGTCTCAACGACTGCAAAGTCTCCTTATAATGCTCCATTGCCAAGATCTCATGGGTCTGAATGTAATGGGGTCAGTTTAAGAGAATGGTTGAACGCTGGGCGACTCAAACGAAGCAAAGCAGAGTGTTTGAGTATATTTAGAAAGATTGTAGATTTGGTGGATGGCTCACACTCTCAGGGGTTTGCATTGCGCAACCTGAACCCGTCTTATATTAAAGTGTTACCATCAAACCAGGTTATCTACCTTGGGTTACAGAAACATATGTTAGATAATGGTGCAAATTCAGAAGTTCTTCAGTTACGAAGTTCCTCTATTCGAAAAAGGATGTCAGAGCAGGAAACATCTCCCTCTCATGATGCATGGTTAAAGAAACAAAAATTTAATGAGTATGTGAGAGGTGTTGGTGATCGGAGTCAGTGCGCTTCAAGGCCTGACTTGTATCTTCAAATTACTGTTGATAGCAAAGTTGGTGCAGCTGGATCAAAAGATTATCACAACCAATATAAGTGTGTCCAATTTCCGAAACATAATATTTGGAAAGTGCCTAGCGTCCCTGACATATCCAATGGAGGTCTACTGCAGTTGATTTCTTTGAATGAAAGATCAGAAGATAAGTGGTATAAAAGTCCCGATGGAGGCTGTACGACATCAGCAAATATCTACTCTCTGGGTGTTCTCTTTTTTGAGTTGCTCAGTCAATTTGACTCTGAAGGATCCCATATTGCAGCAATGTCTGATCTTCATCTTAGGATTCTACCTCAGGCTTTCCTGTCAGAAAATCCTCTGGAAGCCGGATTTTGTCTTTGGCTGTTGCATCCTGAGTCATCATCACGTCCAACAACACGGGAGATACTACGATCTGAAGTATTTAATGGAATTCAGGAGGTTTATAGTGAAAAATTATTATTAGATTTTGACAAAGCAGAAGCACAATCGGAATTGTTATTGCATTTCCTCATCTTGTTAAAAGAGGAGAGGCAAAAGAATGCGTTCAAACTGGAAGAAGTCACCAGATTCTTGGAATCAGATATAGAAGAGGTGGTGAGGGGACATAGCTCTGGAAAATACTTGGTTTCTGCTGGCTTGCATAACGATATATCTTGCCATAATGAGAGTTCATCTCTCAACAAAAAACCTTCATGTTCAGAATCAGTATCCCCTGCATGCCCAATCTCTAATGCAAACCAAATGAGAGTCATAAGAAATATGTGCCAGCTTGAAAATGCTTATGTTTCAATGAGATCTAAAATTCAGATTCCTGAAACAGATGCTGCAACTCACCCAGATAAAGATATACCAAGAGATAGGTTTGTGGCACAAAGAGGCAAGGAACAAGATAAAAAAACAGATTCTTTAGGAGCCTTTTTTGATGGTTTTTGCAAGTATCTACGTTATAGCAAGTTTGAGGAGCGGAGTATATTGAGAAATTCAGATATTAACAGTCTTGGAAATGTAATTTGCTCTCTAAGTTTTGATAGGGATGAAGAGTACTTCGCTGCTGCTGGGGTATCAAAGAAAATAAAAATTTATGAGTTCAGCTCACTTTTCAATGACTTAGCTGAAATCCATTATCCTGTAGTTGAGATGTCAAATGAATCAAAGTTCAGTTGTGTATGCTGGAATAGCTACATCAGGAACTATCTTGCCTCCACAGACTACGATGGCGTTGTTAAGCTATGGGATGGTATTACAGGTCAAGGGTTTGCTCACTTCACTGAACATGAAAAGAGGGCATGGTCTGTTGATTTCTCTCCGGCATACCCTACAAAATTTGCTAGTGGGAGTGATGATTGTTCTGTGAAGCTGTGGAGTATCAATGAGAGAAACTGTGTAGGCACAATCCAGAATGTTGCGAATGTCTGCTGTGTTCAATTCTCTGCTTATTCATCTAATTTACTGGCCTTTGGATCTGCAAATTACTTGACTTATTGCTATGATCTTCGCAATCTTAGAAGCCCCTTGTGTGTGTTGGCTGGCCATCATAAAGCTGTAAGCTATGTCAAATTTTTGGACTCTGTAACACTTGTTTCTTCATCAACCGACAATACATTAAAGATCTGGGATCTCAACAAAACCTCTCCTGTGGGTCCTTCTACTAATGCTTGCAGCTTAACCTTGTCAGGGCATACCAATCAGAAGAATTTCGTGGGTTTATCGGTTGCTGATGGATATATTGCATGTGGCTCTGAAACAAATGAGGTTTATGCCTACTATAAATCTCTTCCCCAGCAAATCACATCACACAAGTTTGGGTCCGTGGATCCCATTAATGGTAAAAAGACTTATGATGACTATGGCCATTTTGTTTCAAGTGTGTGCTGGAAAGGGAAATCAGACATGGTTATTGCGGCCAATTCAAGTGGGTGTATAAAAGTGTTACAGATTGTGTGA 2976 0.4026 MDQELINESMRLGVVAEGLQLQTKDEELSINPESNKIIKPQVDHNDSSHIPPPECNDVRQGTMSRLQHPIRLSSDADDMVEELTVRSCNGSSLDIGTQGNQGPAYNTQSQMQLASDSGVGTLLLGDTGCRNSDQASSKVISRSGFAEYFIKNTIKGKDIVCKNSSSIGLTVESRDQNLMKAGIGTQMDSSVPLSPVSTTAKSPYNAPLPRSHGSECNGVSLREWLNAGRLKRSKAECLSIFRKIVDLVDGSHSQGFALRNLNPSYIKVLPSNQVIYLGLQKHMLDNGANSEVLQLRSSSIRKRMSEQETSPSHDAWLKKQKFNEYVRGVGDRSQCASRPDLYLQITVDSKVGAAGSKDYHNQYKCVQFPKHNIWKVPSVPDISNGGLLQLISLNERSEDKWYKSPDGGCTTSANIYSLGVLFFELLSQFDSEGSHIAAMSDLHLRILPQAFLSENPLEAGFCLWLLHPESSSRPTTREILRSEVFNGIQEVYSEKLLLDFDKAEAQSELLLHFLILLKEERQKNAFKLEEVTRFLESDIEEVVRGHSSGKYLVSAGLHNDISCHNESSSLNKKPSCSESVSPACPISNANQMRVIRNMCQLENAYVSMRSKIQIPETDAATHPDKDIPRDRFVAQRGKEQDKKTDSLGAFFDGFCKYLRYSKFEERSILRNSDINSLGNVICSLSFDRDEEYFAAAGVSKKIKIYEFSSLFNDLAEIHYPVVEMSNESKFSCVCWNSYIRNYLASTDYDGVVKLWDGITGQGFAHFTEHEKRAWSVDFSPAYPTKFASGSDDCSVKLWSINERNCVGTIQNVANVCCVQFSAYSSNLLAFGSANYLTYCYDLRNLRSPLCVLAGHHKAVSYVKFLDSVTLVSSSTDNTLKIWDLNKTSPVGPSTNACSLTLSGHTNQKNFVGLSVADGYIACGSETNEVYAYYKSLPQQITSHKFGSVDPINGKKTYDDYGHFVSSVCWKGKSDMVIAANSSGCIKVLQIV 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03070 991 Gene3D - 650 991 IPR015943 GO:0005515
Aip03g03070 991 SMART WD40_4 717 756 IPR001680 GO:0005515
Aip03g03070 991 SMART WD40_4 950 989 IPR001680 GO:0005515
Aip03g03070 991 SMART WD40_4 894 933 IPR001680 GO:0005515
Aip03g03070 991 SMART WD40_4 845 883 IPR001680 GO:0005515
Aip03g03070 991 SMART WD40_4 759 799 IPR001680 GO:0005515
Aip03g03070 991 SMART WD40_4 802 841 IPR001680 GO:0005515
Aip03g03070 991 SMART WD40_4 670 706 IPR001680 GO:0005515
Aip03g03070 991 Pfam WD domain, G-beta repeat 847 883 IPR001680 GO:0005515
Aip03g03070 991 Pfam WD domain, G-beta repeat 761 799 IPR001680 GO:0005515
Aip03g03070 991 SUPERFAMILY WD40 repeat-like 679 989 IPR036322 GO:0005515
Aip03g03070 991 PRINTS G protein beta WD-40 repeat signature 743 757 IPR020472 -
Aip03g03070 991 PRINTS G protein beta WD-40 repeat signature 786 800 IPR020472 -
Aip03g03070 991 PRINTS G protein beta WD-40 repeat signature 870 884 IPR020472 -
Aip03g03070 991 ProSitePatterns Trp-Asp (WD) repeats signature. 870 884 IPR019775 -
Aip03g03070 991 Gene3D Transferase(Phosphotransferase) domain 1 216 496 - -
Aip03g03070 991 PANTHER PROTEIN SPA1-RELATED 2 124 991 IPR044630 GO:0009640
Aip03g03070 991 PANTHER PROTEIN SPA1-RELATED 2 124 991 - -
Aip03g03070 991 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 852 885 - -
Aip03g03070 991 ProSiteProfiles Trp-Asp (WD) repeats profile. 852 892 IPR001680 GO:0005515
Aip03g03070 991 MobiDBLite consensus disorder prediction 33 53 - -
Aip03g03070 991 MobiDBLite consensus disorder prediction 190 205 - -
Aip03g03070 991 SUPERFAMILY Protein kinase-like (PK-like) 216 496 IPR011009 -
Aip03g03070 991 ProSiteProfiles Trp-Asp (WD) repeats profile. 766 808 IPR001680 GO:0005515
Aip03g03070 991 MobiDBLite consensus disorder prediction 190 212 - -
Aip03g03070 991 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 766 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03070 Aip-Chr3 94695057 94700913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03070 786 932 Miscellaneous Gene Families AT5G08390 28.188 9.72e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03070 K16240 - gmx:100776980 1195.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03070 03 94695057 94700913 Aip03g03070 03 94695057 94700913 ECH
Aip05g01123 05 16168400 16174050 Aip03g03070 03 94695057 94700913 PCT