Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01093 ATGGACAAAGAAACCTTGAAAATGGTTGTCACATTCATCAACCACAACCACATCCACCTAGTATCTGACGAAATATACGCCGCCACGGTTTTTAGCCACCCGGGTTTCACAAGCATAGCTGAGATAATAGAAGAAGAAGACATTAAAATGGAATGTGACCGTAACCTCATTCACATTGTTTATAGTCTCTCAAAGGATATGGGCTTCCCTGGTTTCAGAGTTGGCATCATATACTCCTACAATGACAACGTCGTCAACTGTGCTCGCAAAATGTCAAGCTTTGGATTAGTGTCCACACAAACTCAGCATCTAATAGCAGCCATGCTATCAGATGATGAGTTTGTGCAACGCTTCCTTGCAGAGAGTGCAAGGAGGCTTGCGAAAAGGTATGGGATTTTCTGCAAAGGGCTTAGACAAGTTGGCATAAAATGCTTGCAGAGCGATGGTGGTTTGTTTCTATGGATGGATCTGCGTCCTCTTCTAAAGAAGCAAACGTTCGAAGAGGAAATGGCTCTTTGGAGAGTGATAATTCACAAAGTTAAGATCAATGTTTCGCCTGGTTGTTCCTTTCATTGTTGTGAGCCTGGTTGGTTCAGGGTGTGCTATGCAAACATGGATGATAGGGCTGTGCAAATTTCATTGGCCAGAATGCGTGGCTTTGTGCTCCAGAACAAGGACGTGATGTTATCTTCAAAGAAACCTTGTAGCCCAAGAAACTTAATGCTGACCTTCTCATCCATGAGGATGGATGATTTCTTGATGTCACCTCACTCTCCTATTCCTCAATCGCCTCTTGTCAAAGCTACAACTTGA 813 0.4342 MDKETLKMVVTFINHNHIHLVSDEIYAATVFSHPGFTSIAEIIEEEDIKMECDRNLIHIVYSLSKDMGFPGFRVGIIYSYNDNVVNCARKMSSFGLVSTQTQHLIAAMLSDDEFVQRFLAESARRLAKRYGIFCKGLRQVGIKCLQSDGGLFLWMDLRPLLKKQTFEEEMALWRVIIHKVKINVSPGCSFHCCEPGWFRVCYANMDDRAVQISLARMRGFVLQNKDVMLSSKKPCSPRNLMLTFSSMRMDDFLMSPHSPIPQSPLVKATT 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01093 270 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 62 75 IPR004838 GO:0003824|GO:0009058|GO:0030170
Aip05g01093 270 CDD AAT_like 1 208 - -
Aip05g01093 270 Pfam Aminotransferase class I and II 2 212 IPR004839 GO:0009058|GO:0030170
Aip05g01093 270 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 88 111 - -
Aip05g01093 270 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 56 80 - -
Aip05g01093 270 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 18 41 - -
Aip05g01093 270 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 1 231 - -
Aip05g01093 270 Gene3D Aspartate Aminotransferase, domain 1 74 227 IPR015422 GO:0003824
Aip05g01093 270 SUPERFAMILY PLP-dependent transferases 1 220 IPR015424 -
Aip05g01093 270 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 2 1 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01093 Aip-Chr5 15679881 15680693 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01093 K20772 - gmx:100793020 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01093 05 15679881 15680693 Aip03g03135 03 99801252 99803482 PCT