Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01087 ATGCTCAGTGATTGTTATCTTCATTGCAAGACAAGCACAATGAAGGATTCATCAGAAAAGCTGATTTGGGATCAGAAAAGCGCACCACAGACACGAGCCTCTCCCACAGCAAAGATGATGGTGTGGACCATCCTCTTCGTTTCCCTCACCTACGTTCTCTACACCTTCAAGCTCGTAAGCACCTCCACCACCTGCAGCCACGGTCCATTCTCCATCAACCGCATCTCCTCTTCTCCGTCTCCCTCCAATGCCACTGTCCATTCCCCCATCGGCTCATCCTCCCCCACCAACCTTCGCCACGTCGTGTTCGGAATCGCCGCCTCCTCCAAGCTCTGGGAGCATCGCAAGAACTACATCAAGCTGTGGTACAAGCCCAAGTTGATGAGAGGGGTGGTCTGGCTCGACGACCGAGTCAAGACCCACCGCAAAGAAGGCCTACCGCCGGTGAAGATCTCCACCGACACCTCCAACTTCCCTTACACCAACAAGCTGGGCCACCGCTCCGCCCTCCGAATATCGCGGATCGTGACGGAGACTCTCCGCCTGGGCCTGAAGGACGTCCGGTGGTTCGTGATGGGGGACGACGACACCGTCTTCGTCACGGAGAACCTTCTCAGAATTCTTCGGAAATACGACCACAACCAATACTATTACATCGGTAGCTTGTCGGAGAGCCACTTGCAGAACATATTCTTCTCTTACGGCATGGCGTACGGCGGCGGCGGCTTCGCCATCAGCTACCCTCTTGCGAAGGCTCTGCAGAAGATGCAAGACCGATGCATTAAACGTTACCCTGCTCTGTACGGCTCAGATGACAGAATGCAAGCTTGTATGGCGGAACTCGGTGTTCCACTCACAAAAGAAATCGGTTTTCATCAATACGATGTGTATGGGAACCTCTTCGGGCTTCTTGCCGCACACCCTGTGACGCCATTGGTATCACTCCACCACCTGGACGTTGTTGAGCCAATATTCCCCAACGCCACTCGGGTGGAAGCTCTGAAACGCCTCACCATTCCCATGAAGCTTGATTCCGCCGCCCTCATCCAGCAATCCATCTGCTACGACAAGAACAGCCGCTGGACTGTTTCCGTTTCTTGGGGGTTCGCCGTTCAGATATTCCGCGGCATGTTCTCCGCACGCGAGATGGAGATGCCTTCTAGAACCTTCTTGAATTGGTATAGGAGGGCGGACTACACTGCCTATGCTTTCAACACGCGTCCCGTTAGCAGAAACCCGTGTCAGAAGCCATTTGTTTTCTATTTCTCCAAAGCCACATTCAATTCCACACAGCAACTCACTCTCACTCGCTACGAAAGACACCGTGTCCCTCATCCTGAGTGCCGCTGGAGGATGCCTGACCCTTCTGCTATCGACAATGTCATCGTCTACAAGAAACCGGACCCCCATCTTTGGGATAGAGCGCCTAGGAGAAACTGTTGCAGGGTCATCAAGTCCAACCACCAAGGAACAATGGTCATTGATGTGGGTGTATGCAAGAGCGGTGAGGTTACCGAAATTTAA 1524 0.5335 MLSDCYLHCKTSTMKDSSEKLIWDQKSAPQTRASPTAKMMVWTILFVSLTYVLYTFKLVSTSTTCSHGPFSINRISSSPSPSNATVHSPIGSSSPTNLRHVVFGIAASSKLWEHRKNYIKLWYKPKLMRGVVWLDDRVKTHRKEGLPPVKISTDTSNFPYTNKLGHRSALRISRIVTETLRLGLKDVRWFVMGDDDTVFVTENLLRILRKYDHNQYYYIGSLSESHLQNIFFSYGMAYGGGGFAISYPLAKALQKMQDRCIKRYPALYGSDDRMQACMAELGVPLTKEIGFHQYDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNATRVEALKRLTIPMKLDSAALIQQSICYDKNSRWTVSVSWGFAVQIFRGMFSAREMEMPSRTFLNWYRRADYTAYAFNTRPVSRNPCQKPFVFYFSKATFNSTQQLTLTRYERHRVPHPECRWRMPDPSAIDNVIVYKKPDPHLWDRAPRRNCCRVIKSNHQGTMVIDVGVCKSGEVTEI 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01087 507 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 27 505 - -
Aip05g01087 507 Gene3D - 90 343 - -
Aip05g01087 507 PANTHER FRINGE-RELATED 27 505 - -
Aip05g01087 507 Pfam Protein of unknown function, DUF604 228 481 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01087 Aip-Chr5 15651083 15652847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01087 10 502 Glycosyltransferase AT5G41460 68.919 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01087 - - gmx:100801504 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01087 05 15651083 15652847 Aip05g01087 05 15651083 15652847 ECH
Aip05g01087 05 15651083 15652847 Aip03g03154 03 101673396 101678527 PCT