Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03154 ATGAAAGATCCGGAGAAGATAATTTGGGAACACGCTAGGAGCCCCAAATCCGGCACCCCTCTAGGTGGCGCCGCCGCCTCACAGCACAGAACATTGCCCAAGCTTCTGGTTCTGCTTATCCTCTTCGTTTCAGTCACCTACGTCGTCTACACACTCAAGCTCCTCACCACCTCACGTGACTGTCACGAGCCCCCATTCTCCACCCACACCCACATCCTCTCAGGAATAGGACTAACCGCAATCCCCACCATCAATGCCACCGCCTCCACCCTCAGGCTCTTGAACCGCACCTCCGCCGTCACTCGCCGCGAATCTCGGGAAACCGCCACCGACCAGACACAGCTCCGCCACGTTGTCTTCGGGATCGCGGCCTCGTCGAAGCTCTGGGAGAAGAGGAAGAACTACATCAAGCTATGGTACAAGGCGAGCGAGATGCGCGGCGTGGTGTGGCTGGACAACAAGGTTAGCTCCGGCGGGATGGGAGAGGGGCTGCCGCCGGTGAGAATCTCGGGCGACACTTCGAAGTTCTCGTACACGAACAAGCAGGGACACCGTTCGGCGATCAGGATCTCGCGGATCGTGTCGGAGACGCTGGCGATGGGAATGGAGAACGTGCGGTGGTTCGTGATGGGGGACGACGACACCGTTTTCGTGACGGAGAATCTAATTAGGGTTCTGAGGAAGTACGATCACAACCAGTTCTACTACATTGGGAGCTTATCGGAGAGCCACCTTCAGAACATATACTTCTCTTACGGCATGGCCTACGGCGGCGGAGGacgacgacggagaagccctttgcggcggtgtcgccaacagttccgagcaagcactcaacgtcgaggagaagaggatcgagaagcgagcagaccttccacgagcgacgatggcacccaaTATGATGTGTATGGAAACTTGTTCGGGCTCCTTGCAGCTCATCCCGTGACTCCATTGGTGTCCCTGCACCACCTTGATGTGGTTGAGCCCATCTTCCCCAATGTGAGTCGCGTAGAAGCCCTTCAACGGCTTACGGTACCAATGAAGCTTGACTCAGCAGGCCTCATGCAGCAATCCATCTGCTACGACAAATCAAAGAGCTGGACCATTTCCGTTTCATGGGGTTTCGCGGTTCAGATATTCCGCGGCGTGTTTTCGCCCCGCGAGATGGAAATGCCTTCAAGAACATTCTTGAATTGGTATAGAAGAGCAGATTACACGGCATATGCATTTAACACGCGTCCAGTTAGCAGACACCCATGCCAGAAGCCTTTTGTGTTTTACCTGTCAAAGGCAAGATTGAATTCCACAACACAACAGACACTGACTGAATATGAGAGGCATCGCATTCCTCATCCTGAATGCCGCTGGAAGATGGCTAATCCCGCTTTTCTCGACAGAGTGGAGGTATATAAGAAGCCAGATCCACATCTATGGGATAGAGCTCCAAGGAGGAACTGTTGCAGAGTTGTCAAGTCTTCTAAGAAGAAGAAAGGGACAATGGTGATACATGTGGGTGTGTGTGGGGAAGGTGAGTTTTTTCCACCCCTTCACTGA 1554 0.4942 MKDPEKIIWEHARSPKSGTPLGGAAASQHRTLPKLLVLLILFVSVTYVVYTLKLLTTSRDCHEPPFSTHTHILSGIGLTAIPTINATASTLRLLNRTSAVTRRESRETATDQTQLRHVVFGIAASSKLWEKRKNYIKLWYKASEMRGVVWLDNKVSSGGMGEGLPPVRISGDTSKFSYTNKQGHRSAIRISRIVSETLAMGMENVRWFVMGDDDTVFVTENLIRVLRKYDHNQFYYIGSLSESHLQNIYFSYGMAYGGGGRRRRSPLRRCRQQFRASTQRRGEEDREASRPSTSDDGTQYDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNVSRVEALQRLTVPMKLDSAGLMQQSICYDKSKSWTISVSWGFAVQIFRGVFSPREMEMPSRTFLNWYRRADYTAYAFNTRPVSRHPCQKPFVFYLSKARLNSTTQQTLTEYERHRIPHPECRWKMANPAFLDRVEVYKKPDPHLWDRAPRRNCCRVVKSSKKKKGTMVIHVGVCGEGEFFPPLH 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03154 517 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 26 513 - -
Aip03g03154 517 Pfam Fringe-like 112 248 IPR003378 GO:0016020|GO:0016757
Aip03g03154 517 Pfam Protein of unknown function, DUF604 299 487 IPR006740 -
Aip03g03154 517 PANTHER FRINGE-RELATED 26 513 - -
Aip03g03154 517 Gene3D - 105 261 - -
Aip03g03154 517 MobiDBLite consensus disorder prediction 260 297 - -
Aip03g03154 517 MobiDBLite consensus disorder prediction 276 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03154 Aip-Chr3 101673396 101678527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03154 2 510 Glycosyltransferase AT5G41460 61.450 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03154 - - gmx:100818244 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03154 03 101673396 101678527 Aip03g03154 03 101673396 101678527 ECH
Aip05g01087 05 15651083 15652847 Aip03g03154 03 101673396 101678527 PCT