Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01059 ATGACCGATGTGGTTCCAATGGCGAAGAAGGTTTACCCTGCGGCAGAGGCCTCATGTTCTGGAAAATACACAGTTTGGATGAAATCGCTTGTGTTCCACTCTAACGGCTGCACTGTGTATGATTCAAATGGTGACATCGTTTACCGCGTTGATAACTATGACAAAAAGGGAGCAACTCAAGTTAACCTTATGGATCTACGAGGCACACTTGTCTGTTCCATTCACAAGAAATTACTTGCTTTTGGACGATGGGATGTTTATAGATGCAACGGTTCTGATTCCGATTGTACAAGGCAGCAGCAGAAAACGAAGAAGAAGCCATGGTTTGAAGTGAAAACAAGTTATAAGATGATGATTACGGGAAGAGTAGCCAGTTGCCAAGTCACTACTATAGGCTCCCAAAAATATTGCATACACAGAATCTGTAGCAAAACATCAGGGTTTATGATCTTCAATATGAAGAACGGACACATAGTCGCAAATGCAAAGCAAAAGCAGACATGTTCAGGGATATTACTGGGGAAGGATGTTCTAAGGTTGGATGTGGAGGGAGACATAGATCACTCTCTTATAATGGCTTTTGTCACTGTATTTGCTCTAGTCTGCGGCACAATCTAA 618 0.4223 MTDVVPMAKKVYPAAEASCSGKYTVWMKSLVFHSNGCTVYDSNGDIVYRVDNYDKKGATQVNLMDLRGTLVCSIHKKLLAFGRWDVYRCNGSDSDCTRQQQKTKKKPWFEVKTSYKMMITGRVASCQVTTIGSQKYCIHRICSKTSGFMIFNMKNGHIVANAKQKQTCSGILLGKDVLRLDVEGDIDHSLIMAFVTVFALVCGTI 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01059 205 Gene3D - 17 204 IPR038595 -
Aip05g01059 205 PANTHER - 14 202 IPR007612 -
Aip05g01059 205 SUPERFAMILY Tubby C-terminal domain-like 21 201 IPR025659 -
Aip05g01059 205 Pfam LURP-one-related 23 197 IPR007612 -
Aip05g01059 205 PANTHER PROTEIN LURP-ONE-RELATED 4 14 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01059 Aip-Chr5 15136153 15136918 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01059 - - aip:107643065 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01059 05 15136153 15136918 Aip05g01059 05 15136153 15136918 ECH
Aip05g01059 05 15136153 15136918 Aip03g03236 03 105571903 105572824 PCT