Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03236 ATGGCGAAGAACAAGATTCACCCTCAAGAACTTGCTCCTTCTAATCCTCCTCTTACTCTTTCTGCAAAGGGAGAAACATATACACTGTGGATGAAATCGTTAGTGTTCCACTCCAATGGTTGCACTGTGTATGATTCCAAGGGTGACATAGTGTACCGTGTCGATAACTATGACCGAAAAGGTACAAGAGAAGTTAACCTCATGGATCTTAGAGGCAGAGTTCTCTGCACCATACACAAGAGATTAATAGCTTTGGGACGACGATGGGAAGGGTACAGATCATGCAATAGCAGTAGTAGTGATATTGAGGAGAAGCCATGGTTCCAAGTGAAGAGAAAGAAAATGATGATGATGAAGAAGAAGAGGAGGGAGAAAGTAGCGTGCGAAATAAGGGTAGGGTGTGTTGAATACTGCATAGTGAGAAATAGTGAGAAAGAAGCAGCATATCGGATAGTAAACAAAGACGGAAATGTCATTGCAGAGGCAAAGCAGAAGCAGTCATCCTCAGGGGTAGTTTTGGGAAATGATGTTCTAACTTTGTATGTGGCTCCTAACACAGATCATTCACTTGTTATGGCTTTGGTTACCGCATATGGATTGATATGCGGCACAATGTAA 618 0.4239 MAKNKIHPQELAPSNPPLTLSAKGETYTLWMKSLVFHSNGCTVYDSKGDIVYRVDNYDRKGTREVNLMDLRGRVLCTIHKRLIALGRRWEGYRSCNSSSSDIEEKPWFQVKRKKMMMMKKKRREKVACEIRVGCVEYCIVRNSEKEAAYRIVNKDGNVIAEAKQKQSSSGVVLGNDVLTLYVAPNTDHSLVMALVTAYGLICGTM 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03236 205 SUPERFAMILY Tubby C-terminal domain-like 23 202 IPR025659 -
Aip03g03236 205 Pfam LURP-one-related 21 196 IPR007612 -
Aip03g03236 205 Gene3D - 20 204 IPR038595 -
Aip03g03236 205 PANTHER - 4 203 IPR007612 -
Aip03g03236 205 PANTHER PROTEIN LURP-ONE-RELATED 4 4 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03236 Aip-Chr3 105571903 105572824 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03236 - - adu:107479966 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03236 03 105571903 105572824 Aip03g03236 03 105571903 105572824 ECH
Aip05g01059 05 15136153 15136918 Aip03g03236 03 105571903 105572824 PCT