Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01058 ATGTTTCGTTCTGCAAGATGGTGGACCGACAGGAACAGAGTCAAAGCTCTTTTCAAGCTCCATTTCCATCTCACACAGGTGAATGAATGTGGGGTGGATGCATTGGTGCTGTCAATAGTTCCAGGGGACTTTGGAAAACCAACCACCAGATTGGATCAAGCTACAGTTAGAAATGGAGTTTGTACATGGCATAATCCTGTATATGAAACTGTCAAGTTCATTCAAGACCCAAAGACTGGCAAATTCACTGACAAATTATATCAATTTTTGCTTTCAACGGGTTCATCAAAAGGTAGCCCCATTGGGGAGGCTTCTATAAATATTGCTGACTATGCTGAGGCCACAAAACCATCCTATCTCTCTCTTCCCATCAGGGTTTCTCATTCTGATGCTCTTTTGCATGTATCCATCCAGAGGATTCAAGAAAATAGTGATCAAAGAGAAGAAGAGGAATGTGAAGATGCCAAACAAAAATCCCATGATTGGATCATAAGCAACCATTTAAGCAATGCAGACATAGATGAAAGCACTAGAAGCAACTCTTCTGAAGAAGTCACTGCCAAAGCAATGAACAATAGAGAAGAATTGAGTGTTAATTGCAGCACATCTAGTGAATCTGACACTACATTGTCAAGTTCAGATGACAGCTCTGGACTTGATAGTCCTCGAAAACTTGGACTGAAAAGAAAAAAGAACATCCATTCCAGGAAAAATGTGTTTCTTTCAGGTATGAGCCACAATTCAAAATCTCAAAAACTTGTTATAAGTGACTCCACAACACAAATGCATGATGATATGCATCAGAGAATACACTTTGATTGGCCACCAGGCGATTCGACAAACGGCTCCAACCATGACATTCCAAAGGAAGATTCCGAAGAATCACATCCTACAGAAACTGAAAAACTCAAGGCTGAGCTTGCTGCATTGGCTAGGCATGTGGATGTGTCAGACATGGAACTACAGACCCTTAGAAAGCAAATTGTGAAGGAAACCAAAAGAGGGCAAGACCTCTCAAAGGAAATCCTTATCTTGAAAGAGGAAAGAGACGCATTCAAGTTGGAATGTGAGAATCTCAAGTCTTTCCACAAGCGAATGGACGAGGCCAGATTGCGAAGCAGGTCGCAATTGGAAACCAGAGATCTCGGCGCTTTCGTGGAAGAAATCCGGCAGGAATTAAGTTATGAAAAGGACATGAACGCCAATCTCCGGCTACAGTTAAAGAAGATGCAAGAATCAAATGCTGAACTGGTTCTTGCTGTGCAGGACCTTGAAGAAATGCTGGAGCAATCACAGCGTAATAACAAAGACTCCAAGGAGCTAGTAGAAACAGAAATGGAGAAGCTTGTACAGAGACAAAGCAACGGTAATAACGATACAGAAGCACTTGAGAAGAAGATTATAGACCTCTATGGTGAAATAGAGATGTACAGAAGGGACAAAGATGATTTAGAGGTACAACTGGAACAACTTGCATTAGACTATGAGATATTGAAACAGGAGAATCATAGCATTGTGTATAAGCTTGAGCAAAGCCAAGTTCAAGAACAATTGAAAATGCATTATGAATGTTCATCTCCTCCTCCTAATAATAATAATGATCCTGATCTTGAAATGCATATTGAGAATCTAGAGAAGCAACTCAAAGAACAGTCAGAAGATTTCTCGAATTCTCTTGCTACTATTAAGGAACTCGAAACGCATATCAGGAGATTGGAGGAAGAATTCGATAAGAAGAAACATGGATTCGAAGCTGACCTAGAAGCAGTGACGCGCGACAAAGTTGAACAGGAGCAGAGAGCCATCAAAGCAGAGGAAGCTTTGCGGAAGACAAGAATGGCGAATGCTAAAACTGCCGAGAGGCTGCAAGAGGAGTTTAGAAGGCTCTCGTCTCAAATGACCTCCACATTTGACGCCAATGAGAAAGCTGCCATGAAAGCATTGAAAGAAGCGAGCCAACTGCGTTCGCACAAGAGTTTACTAGAAGAAATGCTGCGAAAAGCTAAACAAGAGATTCAGTTGCTTCAATCTGATTATGATTTAAAACTCGATGATCTCTCAAAACAAATGAATACAATGACGGTTCAGATTCAACAGATGAAGCTGGAGATCGAGGACAAGACAAAGCAGCTAGAAGATCAGAAGAAGAACGGGGAACAAGCTGGTAGCGATTTCTCTGAGGAGATTCGAGTGCTTAAGGCAGAGAATGAAGATCTGAACGGAGAGATTTGGCGGTTACGCGAGCAAGTAGAAGGAAATGAAAGTCGTAGAAACGAGTTGGAACTAATGAAGAAATCGATGGAGGAATCCGAGGAGATGTTACAGAGAGGAAGCGCCGAAAGAAATGAACTGGTGAGTACGATTGCATTGTTAAAGAAGGAAGCAGAGCAGTCAGTTAACGAGGCTAGGCGATTGGAGAAGGAGGTGGAAGCAGTTAGAGCTCAATACAGTGAGTTGAAAGGTTCGGTTTCGGAAGAGGCGGCGGAGAAAGAAAAACTTAGGAAGCAAGTTTTGCAGATGAAGAGTGAGATCAAGAAGAAGGAGGATGCGTTAAGCAGCATGGAGAGGAGGCTTAAGGATAGTTTGAAGAACAAGAAAACTGCTTCAGCTCCTCAGAATTCAAAAGACATGGCAAGTCTGAGGGAAAAAATCAAAATGCTTGAGGGCCTTGTAAAGTCAAAGGAAAAAGCATTGGAGAGTTCATCAAGTTCATTCTTGAATAAGGAGAAGGAACTCCAGACCAAAATTGACGAGTTGGAGAATAAAGTGGAGGAATTCAATCAGATTATTGCTTTGCAGCAGGTTTCTCAGGATTTAAGCATTATTTCTTCAAAAGATGTATGTGATGAAAAGGAGATGGTAAGTGAGTTGACGGAAAGAAACAAGTCAATGGAAAGCGAACTAAAAGAGATGCAAGAGAGATACTTAGAAATGAGCCTCAAATTTGCAGAGGTAGAAGGTGAGAGACAACAGCTTGTTATGACTCTGCGCAACCTCAACCTCAACCTCAAGGCTATTAACAAACCCTAA 3030 0.4162 MFRSARWWTDRNRVKALFKLHFHLTQVNECGVDALVLSIVPGDFGKPTTRLDQATVRNGVCTWHNPVYETVKFIQDPKTGKFTDKLYQFLLSTGSSKGSPIGEASINIADYAEATKPSYLSLPIRVSHSDALLHVSIQRIQENSDQREEEECEDAKQKSHDWIISNHLSNADIDESTRSNSSEEVTAKAMNNREELSVNCSTSSESDTTLSSSDDSSGLDSPRKLGLKRKKNIHSRKNVFLSGMSHNSKSQKLVISDSTTQMHDDMHQRIHFDWPPGDSTNGSNHDIPKEDSEESHPTETEKLKAELAALARHVDVSDMELQTLRKQIVKETKRGQDLSKEILILKEERDAFKLECENLKSFHKRMDEARLRSRSQLETRDLGAFVEEIRQELSYEKDMNANLRLQLKKMQESNAELVLAVQDLEEMLEQSQRNNKDSKELVETEMEKLVQRQSNGNNDTEALEKKIIDLYGEIEMYRRDKDDLEVQLEQLALDYEILKQENHSIVYKLEQSQVQEQLKMHYECSSPPPNNNNDPDLEMHIENLEKQLKEQSEDFSNSLATIKELETHIRRLEEEFDKKKHGFEADLEAVTRDKVEQEQRAIKAEEALRKTRMANAKTAERLQEEFRRLSSQMTSTFDANEKAAMKALKEASQLRSHKSLLEEMLRKAKQEIQLLQSDYDLKLDDLSKQMNTMTVQIQQMKLEIEDKTKQLEDQKKNGEQAGSDFSEEIRVLKAENEDLNGEIWRLREQVEGNESRRNELELMKKSMEESEEMLQRGSAERNELVSTIALLKKEAEQSVNEARRLEKEVEAVRAQYSELKGSVSEEAAEKEKLRKQVLQMKSEIKKKEDALSSMERRLKDSLKNKKTASAPQNSKDMASLREKIKMLEGLVKSKEKALESSSSSFLNKEKELQTKIDELENKVEEFNQIIALQQVSQDLSIISSKDVCDEKEMVSELTERNKSMESELKEMQERYLEMSLKFAEVEGERQQLVMTLRNLNLNLKAINKP 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01058 1009 Coils Coil 788 864 - -
Aip05g01058 1009 Coils Coil 729 749 - -
Aip05g01058 1009 Coils Coil 400 448 - -
Aip05g01058 1009 MobiDBLite consensus disorder prediction 860 879 - -
Aip05g01058 1009 MobiDBLite consensus disorder prediction 284 301 - -
Aip05g01058 1009 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 6 1005 - -
Aip05g01058 1009 MobiDBLite consensus disorder prediction 269 301 - -
Aip05g01058 1009 Coils Coil 902 936 - -
Aip05g01058 1009 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
Aip05g01058 1009 Coils Coil 954 988 - -
Aip05g01058 1009 MobiDBLite consensus disorder prediction 169 219 - -
Aip05g01058 1009 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 12 145 IPR019448 -
Aip05g01058 1009 Coils Coil 321 341 - -
Aip05g01058 1009 Coils Coil 474 501 - -
Aip05g01058 1009 Coils Coil 587 607 - -
Aip05g01058 1009 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 6 1005 - -
Aip05g01058 1009 Coils Coil 651 721 - -
Aip05g01058 1009 Coils Coil 541 582 - -
Aip05g01058 1009 Coils Coil 753 780 - -
Aip05g01058 1009 Coils Coil 877 897 - -
Aip05g01058 1009 MobiDBLite consensus disorder prediction 169 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01058 Aip-Chr5 15131839 15136094 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01058 - - adu:107488255 1825.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01058 05 15131839 15136094 Aip05g01058 05 15131839 15136094 ECH
Aip05g01058 05 15131839 15136094 Aip03g03238 03 105636642 105642582 PCT