Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03238 ATGTTCAGGCCTGCAAGATGGAGAACCGACAAGAACAAGGTCAAAGCTGTTTTCAAGCTCCAATTCCATGTGACTCAGATGCTGCAATCTGGAGTGGATGCATTGGTGCTCTCTATAGTCCCTGTAGACATTGGAAAAGCAACAGCAAGATTAGACAAAGCTTCCGTTAATGGTGGAATTTGTAGATGGGACAATCCTGTCTATGAAACTGTCAAGTTTGTTCAGGACTCCAAGACTGGAAAATTCACTGAGAGAATCTATTACTTTGTGCTCTCCACTGGGTTATCCAAAGCTAGCACCATTGGTGAAGTTTCTATAGACTTTGCAGATTATGCTGAGGCTACAAAGCCTTCCTCTGTCTCTCTTCCCTTCAAGAATTCTCGTTGTGATGCTGTTTTGCATGTATCAATTCAGAGACTACAAGAAAACAATGATAAAAGAGAGGAAGAAGAATGCGAAGATGGAAAAATAAAACATGATGCTAATAATAATAATAATAATAATAAGAGTTTGAGAACCTATTTAACCAATGGACATGCAGATGAAAGCACCAGAAGTGATACATCTGAAGACGTTTCTGCCAAATCAAACACCAGAGGAGCTGAATTGAGTGCTGATTGTAGGACTTCTAGTGGATCTGACTTAACATTGTCAAGTTCTGAGGGCAGCGGTGGGCTTGATACACCTCGAGAACACGGAGTAAGAAATGCTAGCATCCAACCCAACACAAATGGTTTTGTTTCTCCTCCAGGGCACCCTCAGGACCCTCAAAATCCTGCTGCAAATGCTACAGTGTATGATGTGCAACAGAGACCACAATGGGGCTGGTTAGCTGCTTCAGAACATGGTTTGAGTACAGACGATTCAACAAATGATTCTCAGGATGCCCTACCAAAGGAAGGGTCCCAACCAGCAGCTGATATGGAAATTGAAAGGCTCAAAGCTGAACTTACTGCCATTGCCAGGCAGAAGGATATGTCAGACTTGGAACTACAGACTCTCAAGAAACAAATCATAAAGGAAAGCAAAAGGGGACAGGACCTCTCAAAGGAAATCATGAGCTTGAAGGAGGAAAGAGATGCACTCAAAGCAGAATGTCAGAATCTCAAGTCTTTTCACAAAAGAATGGAAGAGGCTAAAGCAAGCACCAAGTCACTATTGGATACTGGAGACCTTCGCACTCTTGTTGAGGAAATTAGACAAGAACTGAGTTATGAGAAGGACCTTAATGCAAATCTTCGATTACAGTTAAACAAGACGCAAGAATCAAATGCTGAACTTGTTCTCGCTGTGCAGGACCTGGATGAAATGTTAGAGCAGAAAAATAAGGAAATATATAATCTTTCCAATAACCATGAACCGAATAAGAACTCTCATGCGATGGGGAGAAAAAGTTTAAAATATGAAACAGAAGATGATGAAGATCAGAAAGAATTGGAAGAGCTGGCTAGGGAGCACAGCGATGCCAAGGAGACTTACTTACTTGAGCAAAAAATTTTAGATCTGTATGGCGAAATAGAGTTGTATAAGAGAGACAAAGATGAGTTAGAGATGCAGATGGAGCAGCTTGCACTAGACTATGAGATATTGAAACAGGAAAACCATGACATAGCATACAAGCTGGAACAGAACCAACTGCAAGAACAGTTGAAAATACAATATGAATGCTCATCTCCTCCTCCTGCTATAGAGGGGATCGAAAGCCACACTGAGAGTCTGGAGAATCAATTCAAGAATCAGTCAGAAGAATTGTCAAATTCTATGGCTACTATCAAGGAACTTGAAGCCCAAGTCTGCAAGTTAGAGGCACAAGTCAGCAAGTTAGAGGAGGAAATGGAGAAACAGGCCCATGGGTTTGAATCTGATCTAGATGCTCTGATACGTGACAAAGCTGAGCAGGAGCAAAGAGCCATCCAAGCTGAGGAGGCTTTGCGTAAGAGCAGGAGCATAGAAAGCCATATCAAAAGTCTGGAAAGTCAACTTATGAAAGAGTCAGAAGAATTGTCAAATTCCCTGGCTACTATCAAGATACTTGAAGCCCAAATCAGCAGGTTAGAGGAGCAACTAGAGAAACAAGCTGATGAGTTTGAGGTTGATCTAGATGCTGTGACACGTGACAAAATCGAGCAGGAGCAAAGAGCCATCCAAGCTGAGGAAGCTTTGCAAAATGTCATGAGCACTGTCGAGAGTTTGGAAAATCAACTTATGAAACAATCAGATGAATTGTCGAATTCTCAGGCTACTATCAAGGTACGTGAAGCCCAAATTAGCCGGTTAGAGGAGAAAATGGAGAAACAGGCCCGTGGGTTTGAAGCTGAGCTTGATACTGTGATGTGTAACAAAGTTGAGCAGGAGCAAAGAGCCATCAATGCTGAGGAAGCCTTGCAAGAGAGCAGGAGCACTGAACGTTGTATCGAGGTTCTGGAAAATCAACTTAAGAAACAATCAGAAGAATTGTCAGATTCTCTGGCTATTATCAAGGTACTCGAAACCCAAATCAGCAGGTTAGAGGAGGAAATGGAGAAACAAGCTCATGGATTTGAAACTGATCTAGATGCTGTGACACGTGACAAGATTGAGCAGGAGCAAAGAGCTATCCGAGCTGAGGAAATTTTGCGTAAGACAAGGCTTAGAAATGCTAATACTGCTGAGCGGCTTCAAGAAGAATTCAAAAGGCTCTCAGTGCAAATGGCCTCTACATTTGATGCAAATGAGAAGGCTACCATGAGAGCAATGAAAGAAGCTAGCGAACTTCGTGCCAGAAAAAGACTGGTGGAACAAATGCTGCATAAAGTCAAAGAAGAGCTTCACTCTGTCAAAGGTGATTATGAGGTAAAACTGATTGAGCTTTCCAATCAAATTGATGTCATGACAGTCAAAATACAACAGATGTCGTTGGAAATTGAGGAGAAGTCCAAGCAGCTTGAAAATCAGAAGAATCATGATGAACAAGTTAGTAGTGATTTCCCTGAGGAAATGCAGAATCTAAAAGCTGAGAATGAAAGGCTTAAAGCAGAGATTTCATGCTTCTCAGAGCACTTAGTACAACAAGAAACTTTGAGAACGGAACTGGAAGCTATGAAGAAATCAGTTGAAGAATCTGAGACTCTGTTGCAGAGAAAGACCGTGGAAAGAAATGAGCTGGTGATTACAATTGTTTTATTGAAGGAGGAGGCAGAACAGCTGCTTGATGAATTAAGTAAAATGAGGGATCTCAAAAATGAAAAAGAAACAGTGGGTAGTAGAGACTTGCAGTCAGAGTTAGAAGAACTTAGGGCTCAATATGATGCCTTGAAACGTTCTCTTTCTGAGGATGAGGCTGAGATAGAAAAATTAAGAAAAGAAATTTTCCAGCTAAAGGGTGAACTGAAGAAGAAGGATGATGCATTAGCCAACAATGAGAAGGATAGGAATGGACACACACAACTTTCTGATGGAGCTAAAACCAGTCCAAAGAACAAAAAATCTGCTCCAAATTCTCAAAATTCAAAAGAAATGGCAAGCCTCAGAGAGAAAGTAAAAATGCTCGAGGCCCTGATAAAGTCAAAGGAAACTGCATTGGAAACGTCAACTTCCTCTTTTCTGGAGAAGGAAAGGGAACTGCAGTCCAAAATTGAGGAACTGGAGGACAAGGTGGAGGAATTCAGTCAGAGCATTGCACTGCAAACGGTTGTCGAGGATAAGTGTGTTACAGTTGAGCCTCCTAATGATTCTGCATGTGTGTCTGGACAAAACGGTGCTGCTGCTGCGTTGTCATTATCCAAGAGCGATGCAAATTCCTCAGAGAAAGAAGCAGATATGTCCAGAGTGGATAATGGGGATGGCAACCTTTGCAGCGACATGTTAACCGAATTATTGTTGTTGAAGGAAAGAAACAAATCGATGGAAAATGAGCTGAAAGAGATTCAAGAAAGATACTCCGAAATGAGTCTAAAGTTTGCAGAGGTAGAAGGTGAAAGACAGAAGCTTGTTATGACTGTACGGTATCTCAAGAATTCACGCAAGGGTGGTCAGTGA 4017 0.4167 MFRPARWRTDKNKVKAVFKLQFHVTQMLQSGVDALVLSIVPVDIGKATARLDKASVNGGICRWDNPVYETVKFVQDSKTGKFTERIYYFVLSTGLSKASTIGEVSIDFADYAEATKPSSVSLPFKNSRCDAVLHVSIQRLQENNDKREEEECEDGKIKHDANNNNNNNKSLRTYLTNGHADESTRSDTSEDVSAKSNTRGAELSADCRTSSGSDLTLSSSEGSGGLDTPREHGVRNASIQPNTNGFVSPPGHPQDPQNPAANATVYDVQQRPQWGWLAASEHGLSTDDSTNDSQDALPKEGSQPAADMEIERLKAELTAIARQKDMSDLELQTLKKQIIKESKRGQDLSKEIMSLKEERDALKAECQNLKSFHKRMEEAKASTKSLLDTGDLRTLVEEIRQELSYEKDLNANLRLQLNKTQESNAELVLAVQDLDEMLEQKNKEIYNLSNNHEPNKNSHAMGRKSLKYETEDDEDQKELEELAREHSDAKETYLLEQKILDLYGEIELYKRDKDELEMQMEQLALDYEILKQENHDIAYKLEQNQLQEQLKIQYECSSPPPAIEGIESHTESLENQFKNQSEELSNSMATIKELEAQVCKLEAQVSKLEEEMEKQAHGFESDLDALIRDKAEQEQRAIQAEEALRKSRSIESHIKSLESQLMKESEELSNSLATIKILEAQISRLEEQLEKQADEFEVDLDAVTRDKIEQEQRAIQAEEALQNVMSTVESLENQLMKQSDELSNSQATIKVREAQISRLEEKMEKQARGFEAELDTVMCNKVEQEQRAINAEEALQESRSTERCIEVLENQLKKQSEELSDSLAIIKVLETQISRLEEEMEKQAHGFETDLDAVTRDKIEQEQRAIRAEEILRKTRLRNANTAERLQEEFKRLSVQMASTFDANEKATMRAMKEASELRARKRLVEQMLHKVKEELHSVKGDYEVKLIELSNQIDVMTVKIQQMSLEIEEKSKQLENQKNHDEQVSSDFPEEMQNLKAENERLKAEISCFSEHLVQQETLRTELEAMKKSVEESETLLQRKTVERNELVITIVLLKEEAEQLLDELSKMRDLKNEKETVGSRDLQSELEELRAQYDALKRSLSEDEAEIEKLRKEIFQLKGELKKKDDALANNEKDRNGHTQLSDGAKTSPKNKKSAPNSQNSKEMASLREKVKMLEALIKSKETALETSTSSFLEKERELQSKIEELEDKVEEFSQSIALQTVVEDKCVTVEPPNDSACVSGQNGAAAALSLSKSDANSSEKEADMSRVDNGDGNLCSDMLTELLLLKERNKSMENELKEIQERYSEMSLKFAEVEGERQKLVMTVRYLKNSRKGGQ 1338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03238 1338 Coils Coil 563 762 - -
Aip03g03238 1338 Coils Coil 986 1013 - -
Aip03g03238 1338 Coils Coil 915 935 - -
Aip03g03238 1338 MobiDBLite consensus disorder prediction 1143 1166 - -
Aip03g03238 1338 Coils Coil 424 451 - -
Aip03g03238 1338 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 650 724 - -
Aip03g03238 1338 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 724 800 - -
Aip03g03238 1338 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 802 1336 - -
Aip03g03238 1338 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 6 648 - -
Aip03g03238 1338 MobiDBLite consensus disorder prediction 1254 1274 - -
Aip03g03238 1338 MobiDBLite consensus disorder prediction 144 260 - -
Aip03g03238 1338 Coils Coil 1017 1129 - -
Aip03g03238 1338 Coils Coil 1191 1218 - -
Aip03g03238 1338 Coils Coil 1159 1186 - -
Aip03g03238 1338 MobiDBLite consensus disorder prediction 161 182 - -
Aip03g03238 1338 Coils Coil 345 379 - -
Aip03g03238 1338 MobiDBLite consensus disorder prediction 283 298 - -
Aip03g03238 1338 MobiDBLite consensus disorder prediction 144 160 - -
Aip03g03238 1338 Coils Coil 1278 1319 - -
Aip03g03238 1338 Coils Coil 472 492 - -
Aip03g03238 1338 Coils Coil 781 846 - -
Aip03g03238 1338 Coils Coil 499 533 - -
Aip03g03238 1338 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 11 146 IPR019448 -
Aip03g03238 1338 MobiDBLite consensus disorder prediction 283 307 - -
Aip03g03238 1338 MobiDBLite consensus disorder prediction 190 225 - -
Aip03g03238 1338 MobiDBLite consensus disorder prediction 1128 1167 - -
Aip03g03238 1338 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 802 1336 - -
Aip03g03238 1338 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 6 648 - -
Aip03g03238 1338 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 650 724 - -
Aip03g03238 1338 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 724 800 - -
Aip03g03238 1338 Coils Coil 961 981 - -
Aip03g03238 1338 MobiDBLite consensus disorder prediction 1128 1142 - -
Aip03g03238 1338 MobiDBLite consensus disorder prediction 235 260 - -
Aip03g03238 1338 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03238 Aip-Chr3 105636642 105642582 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03238 - - adu:107479983 2440.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03238 03 105636642 105642582 Aip03g03238 03 105636642 105642582 ECH
Aip05g01058 05 15131839 15136094 Aip03g03238 03 105636642 105642582 PCT