Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01051 ATGTCGCTGCAAGGAAAGCTGGACAGCTTCAAGAAGCAGCAGGCGAAGTGCCAGTCGACGCTGTCAAGCATCGCGGCGTCGAAGGCTGCCAATCAAAAACAGAAACAGAATCCTGCTTCGGCAGCAGCTTCTCCGGTGCCGGCAATTAAATTCTCAAATGACACAGAGAGGCTTCAACAGATCAACGGTATCCGCAAAGCCCCCGTTGGGGCTCAGATGAAGCGTGTCATCGAACTCCTCTATGAGACAAGGCAGGCTTTTACACCAGAACAGATAAATGAGGCTTGCTATGTGGATATGAGGGCAAACAAAGATGTTTTTGAGAATATGAGGAAAAACCCCAAAGTCAAATTTGATGGGGAACGATTCTCTTACAAGTCGAAGCATGATGTTAAGGACAAAAGTCAGTTGCTTTACCTGATTCGCAAGTTTCCGGAGGGCATTGCTGTTATTGACTTGAAGGATTCCTATCCAGCTGTGATGGAGGACTTGCAGGGTTTGAAAGCCGCAGGGCAGATTTGGCTGCTATCCAACTTTGATTCACAAGAAGACATTGCATATCCTAATGATCCCAGGGTACCCATTAAGGTTGATGATGACCTGAAACAGCTTTTTCGGGGGATTGAATTGCCTCGTGATATGCTTGACATAGAGAGGGATCTCCAAAAGAATGGAATGAAGCCTGCTACTAACACTGCAAAGAGGAGGAGTGCGGCGCAAATGCAAGGCATTACTCCCAAGGCCAAGCCCAAGGCTAAGAAGACCGAAATCAGCAAGAGGACTAAGCTCACCAATGCCCATCTTCCAGAGCTTTTCCAGAAATTGAAAGATTCCTGA 837 0.4719 MSLQGKLDSFKKQQAKCQSTLSSIAASKAANQKQKQNPASAAASPVPAIKFSNDTERLQQINGIRKAPVGAQMKRVIELLYETRQAFTPEQINEACYVDMRANKDVFENMRKNPKVKFDGERFSYKSKHDVKDKSQLLYLIRKFPEGIAVIDLKDSYPAVMEDLQGLKAAGQIWLLSNFDSQEDIAYPNDPRVPIKVDDDLKQLFRGIELPRDMLDIERDLQKNGMKPATNTAKRRSAAQMQGITPKAKPKAKKTEISKRTKLTNAHLPELFQKLKDS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01051 278 Pfam TFIIE beta subunit core domain 71 131 IPR003166 GO:0006367
Aip05g01051 278 PIRSF TFIIE-beta 1 277 IPR016656 GO:0005673|GO:0006367
Aip05g01051 278 PANTHER BNAA02G21830D PROTEIN 1 276 - -
Aip05g01051 278 Pfam TFA2 Winged helix domain 2 132 189 IPR040501 -
Aip05g01051 278 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 60 132 IPR003166 GO:0006367
Aip05g01051 278 MobiDBLite consensus disorder prediction 227 263 - -
Aip05g01051 278 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 276 IPR016656 GO:0005673|GO:0006367
Aip05g01051 278 MobiDBLite consensus disorder prediction 249 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01051 Aip-Chr5 15102172 15104723 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01051 K03137 - gmx:100802433 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01051 05 15102172 15104723 Aip05g01051 05 15102172 15104723 ECH
Aip05g01051 05 15102172 15104723 Aip03g03248 03 105961297 105963748 PCT