Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03248 ATGGGGTTGCAAGAGAAGCTGGAGAAGTGTGAATCAACGCTATCGAGCATTGCAGCAAGCAAGCCTGCTGCAACCCAAAAGTCATCTTCAACCCCAACAGCAGCTGCACTTGCTGCTGCCTCAGCCAATGGAAGGAGCAACATAGCAGCCCCTGCTGTCAAATTCTCCAATGATACAGAGAGGCTTCAGCATATTAACAGCATACGCAAATCCCCTGTCGGTGCTCAGATGAAGCGTGTAATCCATCTCCTGTATGAGACCCGGCAGGCTTTGACGCCAGAGCAAATAAATGAAGCTTGCTATGTTGATATGAAGGCTAATAAAGATGTTTTTGACAATCTGAGGAAAAACCCGAAAGTAAATTATGATGGGCAATGTTTCTCTTACAAGTCAAAGCATAACCTTAAGGACAAAATTCAGCTTCTTCACCTGATACGTAAGTTTCCAGAGGGCATTGCCGTTATTGATCTAAAGGATTCTTACCCAACTGTGATGGAAGACATGCAGGCTTTGAAAGCTGTGAGGCAGATTTGGCTGCTATCGAATTTTGATTCACAGGAAGACATTGCGTACCCCAATGACCCCAGAGTGCCCATTAAGGTGGATGATGACCTTAAACAGCTCTTCCGTAATATCGAATTACCCCGCGATATGATAGATATAGAGAAGGATCTTCAGAAGAATGGAATGAAGCCTGCTACCAACACTGCAAAGAGGAGGAGTGCAGCACAAATTCAAGGCATCTCTCCCAAGCCAAAGGTTAAGAAATCTAGGCGAGAAATCAACAGCAGGACCAAGCTCACCAATGCCCATCTTCCAGAGCTTTTCCAGAAATTGATTAATTGA 846 0.448 MGLQEKLEKCESTLSSIAASKPAATQKSSSTPTAAALAAASANGRSNIAAPAVKFSNDTERLQHINSIRKSPVGAQMKRVIHLLYETRQALTPEQINEACYVDMKANKDVFDNLRKNPKVNYDGQCFSYKSKHNLKDKIQLLHLIRKFPEGIAVIDLKDSYPTVMEDMQALKAVRQIWLLSNFDSQEDIAYPNDPRVPIKVDDDLKQLFRNIELPRDMIDIEKDLQKNGMKPATNTAKRRSAAQIQGISPKPKVKKSRREINSRTKLTNAHLPELFQKLIN 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03248 281 Pfam TFIIE beta subunit core domain 75 134 IPR003166 GO:0006367
Aip03g03248 281 PIRSF TFIIE-beta 2 278 IPR016656 GO:0005673|GO:0006367
Aip03g03248 281 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 61 136 IPR003166 GO:0006367
Aip03g03248 281 PANTHER BNAA02G21830D PROTEIN 5 279 - -
Aip03g03248 281 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 5 279 IPR016656 GO:0005673|GO:0006367
Aip03g03248 281 MobiDBLite consensus disorder prediction 231 261 - -
Aip03g03248 281 Pfam TFA2 Winged helix domain 2 136 193 IPR040501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03248 Aip-Chr3 105961297 105963748 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03248 K03137 - gmx:100802433 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01051 05 15102172 15104723 Aip03g03248 03 105961297 105963748 PCT