Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01050 ATGGGAGAAACCCAACTTGAAGAGTCTGAAGCAACTAATAGACAGATCAGCAGTAACACAAAGTCCAATTCTAAACTGATTGTAGAGAAAACATTTGAGCGTCCTGAGTGGCTACCTGATGGCTGGAATGTGGATTTCAAAACTCGAAAAAGTGGTTCAGCTATGGGACAGGGATATAAGTGTTACATTAATCCGCATGGAAAGAAATTCTACTCCAAATTAGAAGTGTTACGGTATCTTGAAACTATAAAGGGCAACAACTGCAATTCCAGAAAGGAGGAATCCAATACCATCCATTCTCCAAACAATGATGCACTTGAGAAGCCCATGGTTGAGACATCCAGGACTGAGAATTCCGTGGCTGAGAAGTCCACGGCTGGGAAGCCCACGGCTGGGAAGCCCAAGGCTGGGAAGCCCAGGGGTGAGAAGTCCACAACTGGGAAGCCCAGGTCTGAGAAGTCCACAGCTGAGAAGCCTGGGGCTGAGAAGTCCACAGTTGAGAAGCCCAGGGCGGAGAAGTCCACAGCTGAGGATTTACCACCTGGCTGGATAATAGAAGTCAAAGAAAGGAAGAACAGCAAAACCAATAGAAAAGATTTGTTATATATAGATCCAGAGAGTGGATATGTATTCCGTTCCAAGAAGGATGCACTGCGGTATCTCGAGTCTGGAGATATAAGTTCGTGTGCGATTAAACCATTTAAACGGGAAATTCAAGATGAAGATAAATTATCTCCGGCCTCTACAGTCAAAAAGCAGAAAATAAAGCAGTCTGGAATTAACCGACAACTTTTTGCTGGCAAAGAAATATCCGATGAAAGCAGCTTAGAATTGCCAGATGCTAACAGCTCAGAAAAAAGGCAACATGTGGAGGTGTCTTCTGGAATGATGGCTCCTTTTGTACCTACAGGGGAATCTATTGGCCAAATTCAATCGTTAAAGAATGGAGTTGCATACCCTCGCAAAACAAAGAAAATGTCTGATCCAGATGATGTGCAAAATAAGAATGATGTTGTCAATGTGGTTGAAAATGCTAGTAAGAAGAATCACAGTAACCCTACTGTATCAAAAAACAGGGGGTTCAGTGTGGCTCACCGGTCTTCGCCGAGACTTGCTGCAGCAGAACCTGACCAATTGACTAACAGCCTGACCAGTGAACAGTGCCTTGAAGTTCCAAGAAGAAACTTGAGAAGAGGTAGTCAGGGTTTGGCCGCTGACGATCACTTTTTGAAAGAATCCAAATTGCTTGCAAGTGAGATTGCTAAAAGTGGAGAAATTTGTCCTGACTTGAACAAATCCAGCAACAAGAAAGAGCCTTCGGTTCCTCGGCGAGCATCAAAAAGACTTGCTGGATCTGAGCCTGAGCTGATGAGCAACTCCCTCTCCTATGAAACAGCTCCGGAATATAATAAAAGCAAAAAGTCTAAAAGTGGGATCAATACAAACTTGCTTTCATGTGATGGTGAGGCAGGGTTGAAGCTTGTAGAACATGGATCAATGAATGGATTGTCATCCACCAGAGGGAGGAAACACCCCCAAACCTTGCCTGTAACCAAAGATAAACTGGATAAACGTAAAAATGAGGAAATGAATGATGAGAAATCAGAACTTCAGCAATCTCTTGCATTCCATTATTCTTGGTCTGACCCAAGTTTGGAGTTTGCAATTAAGACCCTCACTGGCACATTACCTGCAGAGGATTCAGTTGCCAACAGACCTATAGTGATTTCTGAAACAGATAAGTTGCCTGAAAATGATGTGTTTAAGAATGTTACAGGAAGCAACAGTGACAAAAAACCCAAGGTAAATTCAAGTAAATCCAAGAAGAAGAAAGAGCCTAAAGTGCCTACGCGATTGTCTAAGCGACTTTCTGGCCATGATCCTGAGGTACTTCCTACTGAAACAGCACCTGAATATTCCACTAGAAAATCAGGTAAGATTAAACCAGATGCAAATGAGATTTTAACTAATGGAGCATCCGGGAAGCTTCATGCTGGGGAAGAATCATCCAACCTTATTGTTCATGCATCTGACATGTTGAAAACTAGCAAATGTGGTGAATCATCGAATGGTGATGAGTTGCAAAAATCACAACCTGTTCCCAATGAACAACAACGGGGGCCTGAAGCTGAAAGTATTAATGAGAGATCAGAGCCACAGTTCCCTGTACAGTTTGGGGACAACTGGTCGGATCCATGTGTAGAATTTGCAGTTAAGACTCTCACTGGTTCGGTGACTGTTGATACTGCCAATGTGCCTGTTGTGACACTTGATGTCAATGACCCACCAAATGAGGAATTGTCGGAGAATGCAGTGCAGAAGAGCAGTAATGCTGCTGCCGATAACAACAATCATTGCCAGATCAAGGAAGTGCTTAATGCACCAGTTTGCCGGCCATCGGAACAATGCTTAGGGCAAGGGCAACCTGAGTTGAGATCCAACCCTACATCCTATCAAAGTGATCCTGCATTTGCAAGTAGTGTGTCTTGCGGTGATGAAGGCAAAATAACAAGGAACTCTGATGGGGGACAATCTCTACATGTTGAAGCTGGGAATATGACGCAAATTGATATAAACACACTCTTTTTTGACGACCCATTCACAGAAGATGAACAGATTCTTGAGGATAATTCTATTGCAGAACAAGCACAGCCTGGAACAGAAGCTACGAACCGTGATAACTCTGAAAGAGAGTTTTGTGTTTCCTTCATGGATACTTGGTCAGACCCATGCTTAGAATTTGCATTTAAGACACTCACGGGAGATATCCAAGTTGAGGAAAATATGGCAGAGCAAGGATGTTTCCCGGAACATGCGAACCGACATGACCAGAGAAATGGTGGCTCGGCATTACCGGAAATCGGATCTTCCAGCATCTCCCGAAGTCACATGGCAGAGAAATCCATGCCGCCACAACCACCATCAATGAGCCCTTCGTTCCTATCCCGAAGTCACATAGCAGAGAAATCCGTGCTGCCACAACCATCATTGAGCCATTCCTTCCTGTCCCAAAGTCACATGGCAGAGAAATCCATGCCGCCACAACCACCATCATTGAGCCATTCGTTCCTCTCCCAAAGTCACATGGCAGAGAAATCCGTGCCGCCACAACCACCATCAATGAGCCCTTCGTTCCTATCCCGAAGTCACATGGCAGAGAAATCCGTTCCGCCACAACCACCATCAATGAGCCCTTCCTTCCTCTCCGGAAGTCACATGGCCGAGAAATCCGTGCCGCCACAACCACCATCAATGAGCCCTTCCTTCCTCTCCGGAAGTCACATGGCAGAGAAATCCGTGCCGCCACAACCACCATCAATGAGCCCTTCCTTCCTCTCCGGAAGTCACATGGCAGAGAAATCTGTGCCGACACAACCACCATCATTGAGCCCTTCCTTCCTCTCCCGAAGTCACATGGCAGAGAAATCTGTGCCGACACAACCGCCATCAATGAGCCCTTCCTTCCTCTCTCTAAGTCACATAGCAGATAAACCCATGCCGGCACAACCGCCATCAATGAGCCAGCCCTTCCTCTCCCTAAGTCACATAGCAGATAAACCCATGCCGGCACAACCGCCATCAATGAGCCCTTCGTTCTTACCCCCGACACAACACTCATCACCACAGTCAACGATGAACTCTTCAATCTTCCCCGAAGAAAAATCAAGCCAGCAGCACACAGGAGCCGATGCGCAGAGGCATTATTCTCAGTACAACATTAATTTTCAAAGAAGGTAA 3738 0.4551 MGETQLEESEATNRQISSNTKSNSKLIVEKTFERPEWLPDGWNVDFKTRKSGSAMGQGYKCYINPHGKKFYSKLEVLRYLETIKGNNCNSRKEESNTIHSPNNDALEKPMVETSRTENSVAEKSTAGKPTAGKPKAGKPRGEKSTTGKPRSEKSTAEKPGAEKSTVEKPRAEKSTAEDLPPGWIIEVKERKNSKTNRKDLLYIDPESGYVFRSKKDALRYLESGDISSCAIKPFKREIQDEDKLSPASTVKKQKIKQSGINRQLFAGKEISDESSLELPDANSSEKRQHVEVSSGMMAPFVPTGESIGQIQSLKNGVAYPRKTKKMSDPDDVQNKNDVVNVVENASKKNHSNPTVSKNRGFSVAHRSSPRLAAAEPDQLTNSLTSEQCLEVPRRNLRRGSQGLAADDHFLKESKLLASEIAKSGEICPDLNKSSNKKEPSVPRRASKRLAGSEPELMSNSLSYETAPEYNKSKKSKSGINTNLLSCDGEAGLKLVEHGSMNGLSSTRGRKHPQTLPVTKDKLDKRKNEEMNDEKSELQQSLAFHYSWSDPSLEFAIKTLTGTLPAEDSVANRPIVISETDKLPENDVFKNVTGSNSDKKPKVNSSKSKKKKEPKVPTRLSKRLSGHDPEVLPTETAPEYSTRKSGKIKPDANEILTNGASGKLHAGEESSNLIVHASDMLKTSKCGESSNGDELQKSQPVPNEQQRGPEAESINERSEPQFPVQFGDNWSDPCVEFAVKTLTGSVTVDTANVPVVTLDVNDPPNEELSENAVQKSSNAAADNNNHCQIKEVLNAPVCRPSEQCLGQGQPELRSNPTSYQSDPAFASSVSCGDEGKITRNSDGGQSLHVEAGNMTQIDINTLFFDDPFTEDEQILEDNSIAEQAQPGTEATNRDNSEREFCVSFMDTWSDPCLEFAFKTLTGDIQVEENMAEQGCFPEHANRHDQRNGGSALPEIGSSSISRSHMAEKSMPPQPPSMSPSFLSRSHIAEKSVLPQPSLSHSFLSQSHMAEKSMPPQPPSLSHSFLSQSHMAEKSVPPQPPSMSPSFLSRSHMAEKSVPPQPPSMSPSFLSGSHMAEKSVPPQPPSMSPSFLSGSHMAEKSVPPQPPSMSPSFLSGSHMAEKSVPTQPPSLSPSFLSRSHMAEKSVPTQPPSMSPSFLSLSHIADKPMPAQPPSMSQPFLSLSHIADKPMPAQPPSMSPSFLPPTQHSSPQSTMNSSIFPEEKSSQQHTGADAQRHYSQYNINFQRR 1245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01050 1245 MobiDBLite consensus disorder prediction 135 175 - -
Aip05g01050 1245 PANTHER OS04G0193200 PROTEIN 578 984 - -
Aip05g01050 1245 PANTHER OS04G0193200 PROTEIN 5 594 - -
Aip05g01050 1245 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 169 241 IPR001739 GO:0003677
Aip05g01050 1245 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 28 101 IPR001739 GO:0003677
Aip05g01050 1245 MobiDBLite consensus disorder prediction 1 23 - -
Aip05g01050 1245 MobiDBLite consensus disorder prediction 1200 1245 - -
Aip05g01050 1245 MobiDBLite consensus disorder prediction 1004 1033 - -
Aip05g01050 1245 PANTHER OS04G0193200 PROTEIN 5 594 IPR038945 -
Aip05g01050 1245 PANTHER OS04G0193200 PROTEIN 578 984 IPR038945 -
Aip05g01050 1245 Pfam Methyl-CpG binding domain 33 84 IPR001739 GO:0003677
Aip05g01050 1245 Pfam Methyl-CpG binding domain 177 227 IPR001739 GO:0003677
Aip05g01050 1245 MobiDBLite consensus disorder prediction 501 535 - -
Aip05g01050 1245 MobiDBLite consensus disorder prediction 426 480 - -
Aip05g01050 1245 SUPERFAMILY DNA-binding domain 32 89 IPR016177 GO:0003677
Aip05g01050 1245 MobiDBLite consensus disorder prediction 938 980 - -
Aip05g01050 1245 MobiDBLite consensus disorder prediction 950 965 - -
Aip05g01050 1245 MobiDBLite consensus disorder prediction 1184 1245 - -
Aip05g01050 1245 MobiDBLite consensus disorder prediction 586 666 - -
Aip05g01050 1245 MobiDBLite consensus disorder prediction 513 535 - -
Aip05g01050 1245 MobiDBLite consensus disorder prediction 682 708 - -
Aip05g01050 1245 MobiDBLite consensus disorder prediction 271 291 - -
Aip05g01050 1245 SUPERFAMILY DNA-binding domain 175 234 IPR016177 GO:0003677
Aip05g01050 1245 MobiDBLite consensus disorder prediction 682 726 - -
Aip05g01050 1245 MobiDBLite consensus disorder prediction 87 125 - -
Aip05g01050 1245 MobiDBLite consensus disorder prediction 87 183 - -
Aip05g01050 1245 MobiDBLite consensus disorder prediction 1004 1153 - -
Aip05g01050 1245 MobiDBLite consensus disorder prediction 273 287 - -
Aip05g01050 1245 MobiDBLite consensus disorder prediction 436 450 - -
Aip05g01050 1245 Gene3D - 143 264 - -
Aip05g01050 1245 Gene3D - 1 142 - -
Aip05g01050 1245 MobiDBLite consensus disorder prediction 1109 1153 - -
Aip05g01050 1245 MobiDBLite consensus disorder prediction 453 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01050 Aip-Chr5 15084501 15091474 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01050 - - aip:107643060 2360.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01050 05 15084501 15091474 Aip05g01050 05 15084501 15091474 ECH
Aip05g01050 05 15084501 15091474 Aip03g03253 03 106062521 106068493 PCT