Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03253 ATGGCCGAACCTGATACCGAAACGCCTGAACAAACAAATACCCAGATAAGCAGTAACGCAGAATGCACACCTGAACAACAACTTCAGATTGTAGACAAAGCTATTGATCGCCCTGAGTGGTTACCTGATGGGTGGACTGTGGATATCAGAACTCGCAAAACTGGTTCGCTTACGGGATCTGGATATAAGTGTTACATTGAACCATTAAATGGATACACATTCTACTCCAAACCTGCTGTATTACGATATCTGGAACCTAAGGACAATACATGCATTCCGAAGAAGAAGAAAGCGAAATCCCCGGCCACAGGGTCCCCAAGCATCGTTAGTATCCCTATATCCTTAGTTTGGTTTCGGGTTGCGATTGAGAAATCCATTGCAGAGGATCTACCACCTGGGTGGATAAAAGAAGTAACAATTAGAAAAAACCACAACGGCATCAGGAAAGATCCGGTATATAAAGATCCAGTAAGTGGCCATGCATTCCGTTCCAAGAGGGATGTACAGCGTTATCTTGCATCTGGGTATATTAGGCCTTCTAGAAAAAGAATCCAGGATGGAGACAAGTTAACTCCATCACCTGCTGGTAAAAGACACAAACTGAATGAGTCTGCACCTGAACAACAGCTTTCTGCTGGTGGAGCAACATTTGATAAAAGCAGCTTAGAACTGATAGATGACAACAGCTCAAGAAAAGGACAAGATGTGAACATCCAATCTGGAATGATGATGGTTGCTCCTATTTCTGTTGTAAAGATGCATTCACTAGAGGATGATAGTGCTGAAGACCTTTCTGAAATTGAAAAAATGTCTGATCCAGATGATATGCAAGAGGAGCATGTTGGGAATAGGATGAGAGAGGGGGAGTTCAATGTGCATCGCCAATCTTCACCACAACTCCATAATATGAGAGAGCTGCACAGTCCTTCCCAGGTTTTGAAGCAACTTGGTGGATTTGATGATGACATGAAGACGAATAATTCCATATCCTGTGAAAAGACCCCCAAACAAGGTCGCAAAAGGTCAAAAGTTGATATCAGTGCAGACTTGCAACAACGTGAGGGTGTGTCAGCTGCAGAGCTTGCAGATTGTGCACCGCCAAAAAGAGAGTCAGCAAATAAAAGACGGAAATCTTATAAAACCCCACCTATTACAGGTGATCAACTGGAGAAACTGAGAGGTAAAGAAATGTATGATGAGAAATCAGAACCCCAAGTGTCGTCGGCATTCAACTACACTTCGTCTGACCCAAGCTTAGAAAATGCAACTAATAATCTGCAGAGTATGTTACTAGTTGAGAATGGACCTAATACTACTGGAATCACTACAGTTCTTCAAACTGATATTCAAAAGAAATCGGTTGACAGTGTTACTGGAAGAAGCGGGGATGGAAACCCACAGGTACGTTCAAATAAATCCAAAAAGAAGAAAGAGCTTAAAGTGCCTATGCGAGTATCAAAGCGACTTGCTGGCCTTGAACCTGAGGTACAGCCTTCCGGAAGAGCTCTTGAATATGCCACTAGAAAATCAAGAAAAGAACCACCACCTGCAACTGCTACTGAAATTTCAATTGATGGGGCATCTGACCATCTTAACCTTGAGGAAGAAACCAAGCTTACATGTCATGCATCTCATAGTTTGAAAACAGAAGTACTAAGAGAATCATCAAACCAGAGTGAGAAGTCATGCGATGCCCCAACTGTTCCCAAGGAACAATTGCAGAAAGTTATTGAAGCTGAAAATACCGGTGATGAGAGATCAGAGCTACAGCTTCCAGTGCCATTCGGGGACTCTTGGTCAGATCCATGCCTAGAATTTGCATTCAAGACTCTTACTGACGATGTGCTATTTCATCCTGCCACTGACATTTTGCCTGTTATAACTCCCGATCTTAATTACCTACCAAATACTGAATTGCATGGGGTGATGATAACCAGTGAAGAAGCTCATGATAACTCAAACCAACCCCAGAGCAAGAAAGAGCTTAATATGGTTAATCCCGCAGAACCATTCCCAAGGCAACTAGAGAATGCTCCTAAATTTACAACTAGTGAACCTTATGGTGATGAAGGCTACACAAGGAATTTAGCTGGAGAATCTTTACATAGTGAAGTTGGAAACGTAATGCCACTCATGCATCATACAGTGATACACCAAGAGCCATTGAAGGAAGGTGCACAGGTTCATAAGGGTGAATCCATTATAATCGGGCCACCTCTGGTTGAAACTGGAACTGTAAACCATGATAACTCTAAGTCACAGTTCTGTGCCTCCTTTGCAAATTCTTGGTCTGATCCATGCCTTGAATTTGCATTTAAGACTCTTACAGGTGCGACATCAGCGGACAATAATTTACAGCAACCTCCAAATTTCCATAACCAGATCGATGGTGGCTCATTGTTTCCTGACTTTGGATCTTCCAGCTTTTCTCAGAGTAATTTCTCATTTTACCATGACATAGGAGTGAATTCCATGCCGGGGCAACAATCATCACGTAGCAATCCAATTCCACCCTTAGAAAAGGCGAGCCAGCGAGGTTATCCTGAAGTTGATCCTCAAAATCAATATTCTCAGTTCCAGAATCATTTTCCAAGGTAA 2598 0.4249 MAEPDTETPEQTNTQISSNAECTPEQQLQIVDKAIDRPEWLPDGWTVDIRTRKTGSLTGSGYKCYIEPLNGYTFYSKPAVLRYLEPKDNTCIPKKKKAKSPATGSPSIVSIPISLVWFRVAIEKSIAEDLPPGWIKEVTIRKNHNGIRKDPVYKDPVSGHAFRSKRDVQRYLASGYIRPSRKRIQDGDKLTPSPAGKRHKLNESAPEQQLSAGGATFDKSSLELIDDNSSRKGQDVNIQSGMMMVAPISVVKMHSLEDDSAEDLSEIEKMSDPDDMQEEHVGNRMREGEFNVHRQSSPQLHNMRELHSPSQVLKQLGGFDDDMKTNNSISCEKTPKQGRKRSKVDISADLQQREGVSAAELADCAPPKRESANKRRKSYKTPPITGDQLEKLRGKEMYDEKSEPQVSSAFNYTSSDPSLENATNNLQSMLLVENGPNTTGITTVLQTDIQKKSVDSVTGRSGDGNPQVRSNKSKKKKELKVPMRVSKRLAGLEPEVQPSGRALEYATRKSRKEPPPATATEISIDGASDHLNLEEETKLTCHASHSLKTEVLRESSNQSEKSCDAPTVPKEQLQKVIEAENTGDERSELQLPVPFGDSWSDPCLEFAFKTLTDDVLFHPATDILPVITPDLNYLPNTELHGVMITSEEAHDNSNQPQSKKELNMVNPAEPFPRQLENAPKFTTSEPYGDEGYTRNLAGESLHSEVGNVMPLMHHTVIHQEPLKEGAQVHKGESIIIGPPLVETGTVNHDNSKSQFCASFANSWSDPCLEFAFKTLTGATSADNNLQQPPNFHNQIDGGSLFPDFGSSSFSQSNFSFYHDIGVNSMPGQQSSRSNPIPPLEKASQRGYPEVDPQNQYSQFQNHFPR 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03253 865 MobiDBLite consensus disorder prediction 357 417 - -
Aip03g03253 865 MobiDBLite consensus disorder prediction 497 522 - -
Aip03g03253 865 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 120 194 IPR001739 GO:0003677
Aip03g03253 865 MobiDBLite consensus disorder prediction 367 381 - -
Aip03g03253 865 MobiDBLite consensus disorder prediction 550 570 - -
Aip03g03253 865 PANTHER OS04G0193200 PROTEIN 451 858 - -
Aip03g03253 865 PANTHER OS04G0193200 PROTEIN 451 858 IPR038945 -
Aip03g03253 865 PANTHER OS04G0193200 PROTEIN 3 434 IPR038945 -
Aip03g03253 865 SUPERFAMILY DNA-binding domain 34 90 IPR016177 GO:0003677
Aip03g03253 865 MobiDBLite consensus disorder prediction 182 215 - -
Aip03g03253 865 MobiDBLite consensus disorder prediction 1 24 - -
Aip03g03253 865 MobiDBLite consensus disorder prediction 452 468 - -
Aip03g03253 865 PANTHER OS04G0193200 PROTEIN 3 434 - -
Aip03g03253 865 MobiDBLite consensus disorder prediction 848 865 - -
Aip03g03253 865 SUPERFAMILY DNA-binding domain 108 175 IPR016177 GO:0003677
Aip03g03253 865 MobiDBLite consensus disorder prediction 825 865 - -
Aip03g03253 865 MobiDBLite consensus disorder prediction 319 345 - -
Aip03g03253 865 Pfam Methyl-CpG binding domain 127 175 IPR001739 GO:0003677
Aip03g03253 865 Pfam Methyl-CpG binding domain 39 89 IPR001739 GO:0003677
Aip03g03253 865 MobiDBLite consensus disorder prediction 452 481 - -
Aip03g03253 865 MobiDBLite consensus disorder prediction 182 204 - -
Aip03g03253 865 CDD MBD 130 172 - -
Aip03g03253 865 Gene3D - 7 112 - -
Aip03g03253 865 Gene3D - 119 215 - -
Aip03g03253 865 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 31 106 IPR001739 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03253 Aip-Chr3 106062521 106068493 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03253 - - adu:107479990 1605.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03253 03 106062521 106068493 Aip03g03253 03 106062521 106068493 ECH
Aip05g01050 05 15084501 15091474 Aip03g03253 03 106062521 106068493 PCT