Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01049 ATGGGTTACTCACTCAGCCTCTCACTCTGCTCCATCGTCATCTTTGCCTCTTTTCTCACCTTAGCAAATGCAGCAAACTTTGAGATCGTCAACAATTGTCCCTACACTGTCTGGGCCGCTGCTAGTCCAGGCGGAGGTGTGCGCTTGGACCGAGGCCAGACATGGAACCTTTGGGTGGCACCTGGCACTACCATGGGCCGCATTTGGGGTCGCACCGGATGCAACTTTGATGGCAATGGTCAAGGCCATTGCCAGACTGGAGATTGCACCGGTGGACTCCAATGCCAAGGCTGGGGTGTCCCACCCAACACCTTAGCAGAATTCGCATTGAACCAATATGCTAACCAAGATTTCTATGACATCTCAGTTATAGATGGATTCAACATCCCCATGGACTTCTACCCTCTAAATGGTGGGTGTCACAAGATCAGCTGCACAGCCGACATTGTCGGACAGTGTCCTAACGAGTTGCGAGTACAAGGAGGGTGTAACAACGCTTGCCCGGTGTTCCACAGCAATGAGTATTGCTGCACCGATCCGCAAGCTAGCTGTGGACCCACATATTACTCGAGATTCTTCAAAGATAGGTGCCCTGATGCTTATAGCTACCCTAAAGATGACCCAACCAGCCTTTTCACTTGCCCTGCAGGTTCTAACTACAGGGTTGTGTTCTGTCCTTTGGGGTCATCTAAATTTCCTCTTTTGATGCCTGGAACTAGGAGCATTCAGTAG 732 0.5068 MGYSLSLSLCSIVIFASFLTLANAANFEIVNNCPYTVWAAASPGGGVRLDRGQTWNLWVAPGTTMGRIWGRTGCNFDGNGQGHCQTGDCTGGLQCQGWGVPPNTLAEFALNQYANQDFYDISVIDGFNIPMDFYPLNGGCHKISCTADIVGQCPNELRVQGGCNNACPVFHSNEYCCTDPQASCGPTYYSRFFKDRCPDAYSYPKDDPTSLFTCPAGSNYRVVFCPLGSSKFPLLMPGTRSIQ 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01049 243 PIRSF PR5 2 236 IPR001938 -
Aip05g01049 243 ProSitePatterns Thaumatin family signature. 80 95 IPR017949 -
Aip05g01049 243 ProSiteProfiles Thaumatin family profile. 24 226 IPR001938 -
Aip05g01049 243 Gene3D Thaumatin 24 227 IPR037176 -
Aip05g01049 243 Pfam Thaumatin family 31 226 IPR001938 -
Aip05g01049 243 SUPERFAMILY Osmotin, thaumatin-like protein 25 226 IPR037176 -
Aip05g01049 243 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Aip05g01049 243 PRINTS Pathogenesis-related protein signature 45 54 IPR001938 -
Aip05g01049 243 PRINTS Pathogenesis-related protein signature 67 78 IPR001938 -
Aip05g01049 243 PRINTS Pathogenesis-related protein signature 80 109 IPR001938 -
Aip05g01049 243 PRINTS Pathogenesis-related protein signature 117 133 IPR001938 -
Aip05g01049 243 PRINTS Pathogenesis-related protein signature 216 225 IPR001938 -
Aip05g01049 243 SMART tha2 27 226 IPR001938 -
Aip05g01049 243 PANTHER PATHOGENESIS-RELATED PROTEIN R MINOR FORM 12 226 - -
Aip05g01049 243 PANTHER OS03G0233200 PROTEIN 12 226 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01049 Aip-Chr5 15082310 15083448 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01049 1 226 Receptor kinase-like Gene Family AT5G38280 37.450 6.29e-45 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01049 - - gmx:100240704 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01049 05 15082310 15083448 Aip05g01049 05 15082310 15083448 ECH
Aip05g01049 05 15082310 15083448 Aip03g03255 03 106071887 106072564 PCT