Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03255 ATGGCCATAACCAAAACCCTCTCCATCTTCCTCGTCCTCGCCACCACATACCTCACTGCCGCCAGGGCAGCACAGTTTGACATAATCAACAAATGCTCCTACACCGTCTGGGGCGCCGCGGTGCCCACCGGAGGCGGCCGGCAGCTTAACTCTGGCGAAACATGGACCATTCAGGTTGCCGCCGGCACGACCGCAGCACGCATTTGGGCCCGAACAGGGTGCAGCTTCGACGGTTCAGGAAACGGACACTGCAACACCGGCGACTGCGGCGGTCGGCTCCAGTGCAGCGCATACGGCCAACCACCAAACACGCTGGCAGAATTCGCCCTAAACCAATACAACAACCTGGACTTCTACGACATATCCTTGGTGGATGGTTTCAACGTTCCGATGCAGTTCAGCCCCACCTCAAACGGGTGCACGCGCTCTATTAGCTGCACTGCCGACATCATTGGACAGTGCCCTAGCCAGCTGAAGACTAATGGCGGCTGCAACAACCCTTGCACTGTTTTCAAGACGGATCAGTATTGTTGCAATTCTGGTAGCTGCAGCGCCACTGATTATTCAAAATATTTTAAGACTAGGTGCCCTGACGCATACAGTTACCCTAAGGATGACCAGACAAGCACGTTTACTTGCCCCGGAGGAACCAACTACAAGGTTGTCTTTTGCCCTTAA 678 0.5487 MAITKTLSIFLVLATTYLTAARAAQFDIINKCSYTVWGAAVPTGGGRQLNSGETWTIQVAAGTTAARIWARTGCSFDGSGNGHCNTGDCGGRLQCSAYGQPPNTLAEFALNQYNNLDFYDISLVDGFNVPMQFSPTSNGCTRSISCTADIIGQCPSQLKTNGGCNNPCTVFKTDQYCCNSGSCSATDYSKYFKTRCPDAYSYPKDDQTSTFTCPGGTNYKVVFCP 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03255 225 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Aip03g03255 225 PRINTS Pathogenesis-related protein signature 45 54 IPR001938 -
Aip03g03255 225 PRINTS Pathogenesis-related protein signature 67 78 IPR001938 -
Aip03g03255 225 PRINTS Pathogenesis-related protein signature 80 109 IPR001938 -
Aip03g03255 225 PRINTS Pathogenesis-related protein signature 117 133 IPR001938 -
Aip03g03255 225 PRINTS Pathogenesis-related protein signature 215 224 IPR001938 -
Aip03g03255 225 PANTHER OS03G0233200 PROTEIN 5 225 IPR001938 -
Aip03g03255 225 Pfam Thaumatin family 30 225 IPR001938 -
Aip03g03255 225 Gene3D Thaumatin 24 225 IPR037176 -
Aip03g03255 225 PANTHER THAUMATIN-RELATED 5 225 - -
Aip03g03255 225 SMART tha2 26 225 IPR001938 -
Aip03g03255 225 PIRSF PR5 1 225 IPR001938 -
Aip03g03255 225 SUPERFAMILY Osmotin, thaumatin-like protein 24 225 IPR037176 -
Aip03g03255 225 ProSitePatterns Thaumatin family signature. 80 95 IPR017949 -
Aip03g03255 225 ProSiteProfiles Thaumatin family profile. 23 225 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03255 Aip-Chr3 106071887 106072564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03255 9 225 Receptor kinase-like Gene Family AT5G38280 36.626 3.58e-44 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03255 - - vra:106767605 385.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01049 05 15082310 15083448 Aip03g03255 03 106071887 106072564 PCT