Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00888 ATGGGTTCTGTGGGAGGGGAGGAGGCAATGCAAGATCCTGCAGACCGCGAGGAGCGGATTCTTGTTTCTGTTCGCCTTCGACCTCTCAATGACAAGGAGCGTGCAAGGAATGATGTTCCTGAATGGGAATGTATTAATGACACCACTATCATATACAGGAGCAATCTTTCAGCTTCTGATAGGTCCCTGTACCCAACAGCATACACATTTGACAGAGTATTTAGGGCAGATGCCTCCACTAGGCAAGTTTACGAAGAAGCAGCTAAGGAAGTTGCGCTTTCTGTTGTCAATGGCATCAATTCAAGCATTTTTGCATATGGACAAACAAGCAGCGGAAAGACATATACCATGAGCGGTGTAACTGAATACACTGTAGCTGACATTTTTAATTACATACAAAAGCATACAGAAAGAGAGTTTGTTTTAAAGTTTTCGGCAATTGAGATTTATAATGAGTCTGTCAGGGACCTCCTCAGTACAGATAGTACTCCTCTCAGACTTCTTGACGATCCAGAGAGGGGGACAGTTATTGAAAGACTGACTGAGGCAACTATGAGAGACTGGAACCATTTTAAAGAGCTTATTTCTTTCTGTGAAGCTCAGAGGCAGATAGGGGAGACATCACTGAATGAAGCAAGCTCCAGATCTCATCAGATTCTCAGACTGACAATTGAAAGTTCTGCATGTGAATTCCTTGGAAATGACAAGTCTAGCTCTCTGGCTGCTTCAGTGAATTTTGTGGATCTTGCAGGAAGTGAACGCGCTTCCCAAACAAATTCAGCTGGCACAAGGTTGAAAGAAGGTTGCCACATTAATCGCAGCTTACTAACTCTAGGAACTGTTATCCGCAAACTCAGCAAGGGGAGAAATGGACATATTCCTTTCAGGGATTCAAAGCTAACCCGCATACTGCAGTCGTCGTTAGGGGGTAATGCAAGAACTGCAATCATCTGCACCATGAGCCCTGCACGGATTCATGTTGAACAAACCAGAAACACTCTCTTATTTGCAAGTTGTGCCAAAGAAGTGTCAACTAATGCACAAGTTAATGTAGTAGTGTCTGACAAAGCACTGGTCAAGCAATTGCAAAAGGAGTTGGCCAGACTACAAAGTGAATTGAAAACTTCAGGGTCAGCCCACTCTACATCTGATTGTGCAGCATTACTGAGAGAAAAGGATCAAGAAATTGAGATGTTAAAGACAGAGGTGAAAGAGCTGACTTTGCAGAGGGACGTTGCACAAACTCAAATTAAGGATATGATCCTCCAAGCAATTGGAGATGGCGAGTCTTCAACAGAATTTGATAGTGTGTATTCTCAATATCCCAAAATACGTGTGAGAAATGTGTGGGATTTTGGAAATCAAACAGAGGAGCAAAGTTCATTGAGTGTTGACTGCGAGGAGAGTTTACGGTCTTTTATTGCATATTCGGATGGACACAGTATCTGCTCTGATGATAACTTGTTCCAACTTCCTGACCTTGACAAGAATCTTCGAATGAGAAGTGCTCCGCTCGTGGTCTCACATATAGGCATTCGAGANNACATTGAAGATGAACAAGAAGAGGATGCCGATGATCAGCAAGAAGAGGATTCTTGCAAGGATGTTAAGTGCATTGTGTCTGAGGAGCTAATTAGAAACCCACACACACAACCAAAAGTGGTTGCTTCAAGCTTAAATACATACACTGATTCTATTGCATCATCTCCTTTTGCAAACACAGATACCTCAGCATTGGCTGAAACTGATAATAGAAGAGACAAAAAAGATCTGGATTCATATTCACCTGGGTTACAGGAAAACAAAAGGGTGAACCACTTGCGCCAAGATTTTGTTATTCCCTCCCCAGAGAAAAGTTATGCTTCTCCCTGGCTCAGAGAAATCGGTACATCTAGTTCTAGAAGCTTGAGGTTTAGCAGAAGTAGAAGTTGTAGAGCAAGTCTCATGAGGAATTCATCTTCGTATTGGTTCGATGACGAAGAAAGTATTCAGAGCACAACCCCAATAGGGAATGAAAAACACTTCACTAGAAGACCTGATGAACTTCAAAGCAAGGCTTATGTCCTAGACCAAAACACCTATTTGGAGAGGCTGCCCCCATGGAATGCCGGTGAGAATTCTGTGGAAACTTCTGCCGTTGATGATGTACAGAATGTGGAATCCTCCATTGACAAGGAAACTAAGAGCAATTGTCCTGAAGCTTCAACTCCACAAATAAAAGAAGAGGAAGATCTGAAAACTATGAATTCACCAACTGACCATGAGGTGTCCAAGACAGGATTGGATCCTGCAGTATCTGCAAAGAATTTCAAAGACGTTGGTGTGGACCCAGTGCAAGCTGAAGGAGACAGTAGTCCAGACTGGCCTTCAGAATTCAAGAGGCTGCAAAGAGAGATTGTTGAACTCTGGGATGCTTGTTATGTTTCATTGGTTCACAGGACTTACTTTTTCCTTCTATTCCAAGGTGATCCCTCAGATTCTATTTACATGGAAGTAGAGCATAGAAGGCTATCCTATCTTAAGCAGACTTTCTCCCAAGGCAAACACACTGTGGAAGATGGAAGAATTCTTACAGCTCAGTCAAGCATGAGAACTATTAAAAAAGAGAGGCAGATGCTGTGCAAGCAAATGCTGAGGAGGCTGTCCAAGTCTGAAAGAGAGAACCTCTACTTGAAATGGGGCCTTCTTTTGAGTTCCAAGAATAGGAGAGTGCAGTTGGCGAATCGTCTATGGAGTGACACAAAGGACATGGAGCACGTTAGAGAGAGTGCAGCCATTGTTGCAAAGCTGGTTGGTTCAGTTCAGCCAGAGCAAGCTTTTAAGGAGATGTTTGGACTTAACTTTGCCCCAAGCCCCACAAACAGGAAATCTCTTAGTTGGACAAGCAGCATGAGGAATATTTTGTGA 2907 0.43 MGSVGGEEAMQDPADREERILVSVRLRPLNDKERARNDVPEWECINDTTIIYRSNLSASDRSLYPTAYTFDRVFRADASTRQVYEEAAKEVALSVVNGINSSIFAYGQTSSGKTYTMSGVTEYTVADIFNYIQKHTEREFVLKFSAIEIYNESVRDLLSTDSTPLRLLDDPERGTVIERLTEATMRDWNHFKELISFCEAQRQIGETSLNEASSRSHQILRLTIESSACEFLGNDKSSSLAASVNFVDLAGSERASQTNSAGTRLKEGCHINRSLLTLGTVIRKLSKGRNGHIPFRDSKLTRILQSSLGGNARTAIICTMSPARIHVEQTRNTLLFASCAKEVSTNAQVNVVVSDKALVKQLQKELARLQSELKTSGSAHSTSDCAALLREKDQEIEMLKTEVKELTLQRDVAQTQIKDMILQAIGDGESSTEFDSVYSQYPKIRVRNVWDFGNQTEEQSSLSVDCEESLRSFIAYSDGHSICSDDNLFQLPDLDKNLRMRSAPLVVSHIGIRXXIEDEQEEDADDQQEEDSCKDVKCIVSEELIRNPHTQPKVVASSLNTYTDSIASSPFANTDTSALAETDNRRDKKDLDSYSPGLQENKRVNHLRQDFVIPSPEKSYASPWLREIGTSSSRSLRFSRSRSCRASLMRNSSSYWFDDEESIQSTTPIGNEKHFTRRPDELQSKAYVLDQNTYLERLPPWNAGENSVETSAVDDVQNVESSIDKETKSNCPEASTPQIKEEEDLKTMNSPTDHEVSKTGLDPAVSAKNFKDVGVDPVQAEGDSSPDWPSEFKRLQREIVELWDACYVSLVHRTYFFLLFQGDPSDSIYMEVEHRRLSYLKQTFSQGKHTVEDGRILTAQSSMRTIKKERQMLCKQMLRRLSKSERENLYLKWGLLLSSKNRRVQLANRLWSDTKDMEHVRESAAIVAKLVGSVQPEQAFKEMFGLNFAPSPTNRKSLSWTSSMRNIL 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00888 968 PANTHER ATP-BINDING MICROTUBULE MOTOR FAMILY PROTEIN 2 968 - -
Aip05g00888 968 Pfam Kinesin motor domain 25 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g00888 968 ProSiteProfiles Kinesin motor domain profile. 19 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g00888 968 Gene3D Kinesin motor domain 10 374 IPR036961 -
Aip05g00888 968 MobiDBLite consensus disorder prediction 580 596 - -
Aip05g00888 968 PRINTS Kinesin heavy chain signature 98 119 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g00888 968 PRINTS Kinesin heavy chain signature 207 224 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g00888 968 PRINTS Kinesin heavy chain signature 243 261 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g00888 968 PRINTS Kinesin heavy chain signature 293 314 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip05g00888 968 Coils Coil 389 416 - -
Aip05g00888 968 Coils Coil 352 379 - -
Aip05g00888 968 ProSitePatterns Kinesin motor domain signature. 242 253 IPR019821 GO:0003777|GO:0005524|GO:0007018
Aip05g00888 968 PANTHER CENTROMERE PROTEIN E 2 968 - -
Aip05g00888 968 CDD KISc_CENP_E 20 343 - -
Aip05g00888 968 Pfam Domain of unknown function (DUF3490) 791 950 IPR021881 -
Aip05g00888 968 MobiDBLite consensus disorder prediction 570 598 - -
Aip05g00888 968 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 377 IPR027417 -
Aip05g00888 968 SMART kinesin_4 17 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00888 Aip-Chr5 12250878 12257855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00888 13 374 Miscellaneous Gene Families AT5G06670 43.243 3.24e-82 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00888 K11498 - gmx:100809766 1289.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00888 05 12250878 12257855 Aip07g02473 07 103586537 103591229 ECH
Aip07g02473 07 103586537 103591229 Aip05g00888 05 12250878 12257855 ECH
Aip05g00888 05 12250878 12257855 Aip05g00888 05 12250878 12257855 ECH
Aip03g00808 03 7834966 7842248 Aip05g00888 05 12250878 12257855 ECH
Aip05g00888 05 12250878 12257855 Aip01g00733 01 12393609 12402665 PCT