Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00808 ATGGGGGCTATTGGTGGTGAGGAGCTGCTGAAATGGGAGAAGATGCAAGCGCTAAGTGGTCGCGAAGAGAAGATTTTTGTGTTGATAAGGCTAAGGCCTTTGAATGAGAAGGAAACTGCTGCAAATGAAACCGCAGACTGGGAATGCATTAATGATACTACCGTCTTGTACCGGAACACATTACGGGAGGGTTCAACATTTCCAAGTGCCTATACATTTGACAGAGTATTTCGGGGTGACTGTGATACAAGACAGGTGTATGAGGAAGGAGCAAAAGAAATCGCTCTTTCAGTTGTTAATGGGATTAACTCCAGTATTTTTGCATATGGGCAAACAAGCAGTGGAAAGACATATACAATGGTTGGAATAACTGAATATGCTGTAGCAGATATTTTTGACTATATAAAAAGGCATGAGGAAAGAGCATTTGTGATAAAGTTCTCAGCAATTGAAATTTACAATGAAGTTGTTAGAGACCTCCTCAGTACAGACAATACTCCACTTAGGCTGCGTGATGATCCTGAGAGAGGACCCATTTTAGAGAAACTTACAGAGGAGAACTTACGGGACTGGGGGCATTTGCAAGAGCTTCTATCATTTTGTGAAGCTCAGAGACAGGTAGGAGAGACATACCTAAATGAAAAGAGTTCAAGATCTCATCAAATTATCAGATTGACAATAGAAAGTTCTGCCAGGGAATTCTTGGGCAAAGGTAACTCAGCCACCCTAGCTGCCAGCGTGAATTTTGTTGATTTGGCCGGAAGTGAGCGTGCATCTCAGTTATCATCAGCTGGGGTGAGACTGAAAGAAGGTTGTCATATAAACCGGAGTTTACTTACTCTTGGAACAGTCATCCGCAAGCTGAGCAAGGGAAGAAATGGACACATTAATTACAGAGATTCAAAGTTGACACGCATACTTCAGCCTTCCATAGGTGGCAATGCTAGAACAGCCATTATTTGTACATTGAGCCCTGCACGAAGTCATGTTGAGCAAACAAGAAACACGCTTCTTTTTGCTTGTTGTGCAAAAGAAGTGACCACCAAAGCGCAGGTTAATGTGGTGATGTCTGATAAGGCCTTGGTTAAGCAATTGCAAAAAGAGGTAGCTAGGTTGGAAAGTGAGTTAAGAACCCCTAATCCCACTGCCTCCAATTGTGATTACGTATCATTGTTGAGGAAGAAGGATCTCCAGATAGAAAAGTTGGAGAAGGAAGTTAAGGAGCTAGCTAAGCAACGTGATCTTGCTCAATCAAGGGTTGAGGATTTGCTTCGCATGATCAAAGAGGATCAGAAATCTAAAAAAGACGGGGAAGATAACTGGGATGATGACCATTCAGTATCTGAATCATCAAGTATTTGTGGTCCACACCGTCCAGATAGGCGCATGAGAGAGTTCGACAATCCCCATTTTGATGATGGTGATGACACTGGAAGTAGTCATGAAGAATACCCTGATGAAGTTTGCAAAGAAGTTCAATGTATTGAGCTGGAGGAGTCAAGTCGAGACAACTCAGAACATCTTGATCCATCACTAAGTGACAATGGAGAATTAGCATTAACAGTATCTGGAGAGGAAAATGAAACGATGAATGAAGGAAGAGAAGAGAGTCAAATTCAAAACAACTCATCATATAGTTTACTTGATCAATTTTCACAAGACATATCAGGAAGTATGTCAAGTTCTAGAAGTCTTAAATTAACTCGGAGCTGGAGTTGTAGGGAATACCACATGACTGGTTCTCCCGAGAGAGCAGGAGAAATGGATAGGACTCCCGCCAATGGGTTTGAAAGATTCCCTGGAAGACCGGATAGTTGGAGAAGGAAGTTAGCTCCGCTAGATTTTGGGGATTCCACAAGATTTGGAGATGGTTCTCAGTCTTCTATCGGAAGTCCATCTGCAAATGAGTTTGGAGAAGAAGTTACTAGCATTCAAACTTTTGTTGCTGGGATGAAGGAAATGGTCAAACTTGAGTATCAGAAGCAGCTTGTTGATGGTCAGGGTGAAGAGACACAAGGAAAATCATCCGTGAAGAATGTGAAAGATGTAGGGGTTGATCCAATGTTAGAGGCACCTGGAACTCCTCTAAATTGGTCTCTGCAGTTCACAAAGCAACAAAGGGAGATAATTGAACTGTGGAAAGCTTGCTGCGTACCATTGACGCACAGGACCTACTTCTTTCTTTTGTTCAGGGGTGATCCAAAAGACTCGATTTACATGGAGGTAGAGCTGAGAAGACTAACTTTCCTCAAAGAAACATTTTTCAGTGCAAACGGGTCTCTGAAGGATGCTCCAACAATCACGCTTGCTGCAAGTGTGAAGGCTCTTCGGCGAGAGAGAGAAATGCTGGTCAAGCTTATGCAGAAAAGGCTTTCTGCAGATGAGAGAACAAAGCTGTTCAAGGAATGGGACATTCCGTTGGATTCGAAGCGCAGGAGGATGCAGCTAGCAACCCGTTTATGGAGTAACACTAATGATATGAACCATGTAATGGAGAGTGCCACAGTAGTTGCAAAGTTGGTGAGGTTCTCAGAGCAGGGTATGGCCCTTAAGGAGATGTTTGGTCTAAGCTTCACACCCCAACACACAGTACGTAGATCTTCATGGAGAAGCAGCAGAGCATCTCTCTAA 2631 0.4303 MGAIGGEELLKWEKMQALSGREEKIFVLIRLRPLNEKETAANETADWECINDTTVLYRNTLREGSTFPSAYTFDRVFRGDCDTRQVYEEGAKEIALSVVNGINSSIFAYGQTSSGKTYTMVGITEYAVADIFDYIKRHEERAFVIKFSAIEIYNEVVRDLLSTDNTPLRLRDDPERGPILEKLTEENLRDWGHLQELLSFCEAQRQVGETYLNEKSSRSHQIIRLTIESSAREFLGKGNSATLAASVNFVDLAGSERASQLSSAGVRLKEGCHINRSLLTLGTVIRKLSKGRNGHINYRDSKLTRILQPSIGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVMSDKALVKQLQKEVARLESELRTPNPTASNCDYVSLLRKKDLQIEKLEKEVKELAKQRDLAQSRVEDLLRMIKEDQKSKKDGEDNWDDDHSVSESSSICGPHRPDRRMREFDNPHFDDGDDTGSSHEEYPDEVCKEVQCIELEESSRDNSEHLDPSLSDNGELALTVSGEENETMNEGREESQIQNNSSYSLLDQFSQDISGSMSSSRSLKLTRSWSCREYHMTGSPERAGEMDRTPANGFERFPGRPDSWRRKLAPLDFGDSTRFGDGSQSSIGSPSANEFGEEVTSIQTFVAGMKEMVKLEYQKQLVDGQGEETQGKSSVKNVKDVGVDPMLEAPGTPLNWSLQFTKQQREIIELWKACCVPLTHRTYFFLLFRGDPKDSIYMEVELRRLTFLKETFFSANGSLKDAPTITLAASVKALRREREMLVKLMQKRLSADERTKLFKEWDIPLDSKRRRMQLATRLWSNTNDMNHVMESATVVAKLVRFSEQGMALKEMFGLSFTPQHTVRRSSWRSSRASL 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00808 876 MobiDBLite consensus disorder prediction 430 446 - -
Aip03g00808 876 Pfam Kinesin motor domain 30 346 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g00808 876 PANTHER KINESIN-LIKE PROTEIN KIN-7F 6 876 - -
Aip03g00808 876 Coils Coil 355 375 - -
Aip03g00808 876 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 380 IPR027417 -
Aip03g00808 876 MobiDBLite consensus disorder prediction 578 603 - -
Aip03g00808 876 MobiDBLite consensus disorder prediction 430 486 - -
Aip03g00808 876 ProSitePatterns Kinesin motor domain signature. 245 256 IPR019821 GO:0003777|GO:0005524|GO:0007018
Aip03g00808 876 PANTHER CENTROMERE PROTEIN E 6 876 - -
Aip03g00808 876 CDD KISc_CENP_E 24 346 - -
Aip03g00808 876 Coils Coil 392 426 - -
Aip03g00808 876 SMART kinesin_4 22 354 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g00808 876 Gene3D Kinesin motor domain 16 377 IPR036961 -
Aip03g00808 876 PRINTS Kinesin heavy chain signature 101 122 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g00808 876 PRINTS Kinesin heavy chain signature 210 227 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g00808 876 PRINTS Kinesin heavy chain signature 246 264 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g00808 876 PRINTS Kinesin heavy chain signature 296 317 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g00808 876 Pfam Domain of unknown function (DUF3490) 701 861 IPR021881 -
Aip03g00808 876 ProSiteProfiles Kinesin motor domain profile. 24 346 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g00808 876 MobiDBLite consensus disorder prediction 455 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00808 Aip-Chr3 7834966 7842248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00808 22 458 Miscellaneous Gene Families AT5G06670 37.639 7.87e-81 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00808 K11498 - gmx:100820012 1247.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00808 03 7834966 7842248 Aip03g00808 03 7834966 7842248 ECH
Aip03g00808 03 7834966 7842248 Aip05g00888 05 12250878 12257855 ECH
Aip03g00808 03 7834966 7842248 Aip07g02473 07 103586537 103591229 ECH