Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00802 ATGGTGAACCTGGTAGCCGCTCACTGTTCTTTTCTGCAATGGCTCATGAAAATCACGGCCGGGGTGAAACCCTACACAGTAGAGATACACCCGGAAACACACATGAGATTCTGGGTTCCTTCATATGCCATCTCTAGTCCTAACCTCGTTTCCAAGTCCAAGAAGCCAGTAGTAGTTCTCCTCCACGGCTTCTGCGGAGATGGAATCATGACCTGGCAATTCCAAGTTGCATCCTTATCCAAACACTATGCTGTTTACGTACCAGACTTTCTCTTTTTTGGCGGCTCCTTCACCGACAGTCCTAACCGATCGCTAGAGTTTCAAGCGGAGTGTTTAGCCGTGGGATTGGGGAAGCTCAGGGTGGAGAAGTGCGTGCTGGTTGGGTTCAGCTATGGTGGGATGGTGGCCTTTAAGATGGCGGAAATGTATCCTGATATGGTGCATGGCATGGTCATCTCTGGCGCCGTTGTGGCCATCAAAGAGTCCATCATTATGGAGATAGTGAACGGTGTTGGATTTTCTTCGTGTTCAGAGATGTTAATGCCATCCACTGTTGATGGAGTCAAGGGCCTTCTCTCTTTAGGGATTCACAAAAACATTTCATTCCCTAATCGATTTCACAACGACTTTCTCAAGGTGATGTTCAGCAACAGGAAAGAAAGATGTGAGCTCTTGGAGGCCTTACACATTAGCTACAAACACATCAACATTTCAATTTTTTCTCAGCGAATTCATCTTCTGTGGGGTGAGAATGATAAGATTTTCAAAAAGGAGCTTGCACACAATATGAAAGAGCTGCTGGGAAATAAGACAACATTTGAAGGCATAAAGAATGCTGGTCACCTGGTTCATATGGAGAGACCCTGTGCATTTAATACCTCTCTCAACCATTTTCTTTCTTCCCTCTTATTCCCAACTCCCAATTAA 927 0.4542 MVNLVAAHCSFLQWLMKITAGVKPYTVEIHPETHMRFWVPSYAISSPNLVSKSKKPVVVLLHGFCGDGIMTWQFQVASLSKHYAVYVPDFLFFGGSFTDSPNRSLEFQAECLAVGLGKLRVEKCVLVGFSYGGMVAFKMAEMYPDMVHGMVISGAVVAIKESIIMEIVNGVGFSSCSEMLMPSTVDGVKGLLSLGIHKNISFPNRFHNDFLKVMFSNRKERCELLEALHISYKHINISIFSQRIHLLWGENDKIFKKELAHNMKELLGNKTTFEGIKNAGHLVHMERPCAFNTSLNHFLSSLLFPTPN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00802 308 PANTHER EPOXIDE HYDROLASE 4-LIKE 2 299 - -
Aip05g00802 308 Pfam alpha/beta hydrolase fold 56 159 IPR000073 -
Aip05g00802 308 SUPERFAMILY alpha/beta-Hydrolases 23 299 IPR029058 -
Aip05g00802 308 Gene3D alpha/beta hydrolase 20 302 IPR029058 -
Aip05g00802 308 PANTHER SI:DKEY-122A22.2 2 299 - -
Aip05g00802 308 PRINTS Epoxide hydrolase signature 82 97 IPR000639 GO:0003824
Aip05g00802 308 PRINTS Epoxide hydrolase signature 126 139 IPR000639 GO:0003824
Aip05g00802 308 PRINTS Epoxide hydrolase signature 140 153 IPR000639 GO:0003824
Aip05g00802 308 PRINTS Epoxide hydrolase signature 276 298 IPR000639 GO:0003824
Aip05g00802 308 PRINTS Alpha/beta hydrolase fold signature 82 97 IPR000073 -
Aip05g00802 308 PRINTS Alpha/beta hydrolase fold signature 126 139 IPR000073 -
Aip05g00802 308 PRINTS Alpha/beta hydrolase fold signature 140 153 IPR000073 -
Aip05g00802 308 PRINTS Alpha/beta hydrolase fold signature 244 258 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00802 Aip-Chr5 10674311 10696362 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00802 56 151 Acyl Lipid Metabolism Gene Families AT3G05600 34.906 3.05e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00802 - - aip:110271912 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00802 05 10674311 10696362 Aip05g00802 05 10674311 10696362 ECH
Aip05g00802 05 10674311 10696362 Aip01g00810 01 14150958 14154958 PCT