Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00810 ATGGTGAATCTTGTGGCAGCACAGAAGCCCTTAATGCATGCTCTAATGAAGATGGCAGGGATAACTCCCTATACAGTTGAGATAGAGCCAGGGACAGTGATGAGTTTCTGGGTCCCTTCAGAGACCGTAAAGAAACCAAAGAAAAAAGACCAAAAACCCCAAATCATATCCCAACCCAAGAAGCCAACTGTGGTGCTGGTGCACGGGTTCGCCGCCGAAGGGATAGTGACGTGGCAGTTCCAGATTGGAGCTCTAACAAAGAAATACTCTGTCTACGTTCCTGACCTTCTTTTCTTCGGAGGCTCCAAAACCAACAAGACGGAGAGGTCACCGACGTTCCAAGCGCAGTGTCTGGCGGCGGCGCTGAGGAAGCTTGGGGTGGAGAAGTGTGTTGTGGTTGGGTTTAGTTATGGTGGAATGGTGGCTTTTAAGATGGCCGAGATGTATCCTGAGATGGTCCAAGGACTGATCATCTCAGGGTCCATCTTGGCCATGACGGATTCCATCAGTGTTACCACGCTGCAAGAGCTTGGATTTTCTTCGTCGTCCGAGCTCTTGCTGCCTACATCTGTGAAGGGCCTTAAGGCCCTTCTCTCTGTTGCTGCCCACAAGAAGCTGTGGTTCCCGGATCGTTTGCACAGAGATTTTCTTGAGGTGATGTTCTCGAATAGGAAGGAGCGAGGTGAGTTACTAGAGGGCTTAGTAATTAGCAACAGAGACATCACCATCCCAAACTTTCCACAGAGAATACATCTTCTATGGGGCGAAAATGATCAAATTTTCAAATTAGAACTCGCGCAGAATATGAAAGAGCAATTGGGAGAGAGAAGCACATTAGAAGGAATAAAGAAAGCTGGTCACTTAGTTCATCTAGAGCGCCCATGTGTCTACAATAGATGCCTCAAGAAGTTCATTGATTCCATCTTTTCACCAAGTCAACCCAGAAATTAA 951 0.4742 MVNLVAAQKPLMHALMKMAGITPYTVEIEPGTVMSFWVPSETVKKPKKKDQKPQIISQPKKPTVVLVHGFAAEGIVTWQFQIGALTKKYSVYVPDLLFFGGSKTNKTERSPTFQAQCLAAALRKLGVEKCVVVGFSYGGMVAFKMAEMYPEMVQGLIISGSILAMTDSISVTTLQELGFSSSSELLLPTSVKGLKALLSVAAHKKLWFPDRLHRDFLEVMFSNRKERGELLEGLVISNRDITIPNFPQRIHLLWGENDQIFKLELAQNMKEQLGERSTLEGIKKAGHLVHLERPCVYNRCLKKFIDSIFSPSQPRN 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00810 316 PRINTS Alpha/beta hydrolase fold signature 88 103 IPR000073 -
Aip01g00810 316 PRINTS Alpha/beta hydrolase fold signature 132 145 IPR000073 -
Aip01g00810 316 PRINTS Alpha/beta hydrolase fold signature 146 159 IPR000073 -
Aip01g00810 316 PRINTS Alpha/beta hydrolase fold signature 250 264 IPR000073 -
Aip01g00810 316 SUPERFAMILY alpha/beta-Hydrolases 59 307 IPR029058 -
Aip01g00810 316 PRINTS Epoxide hydrolase signature 88 103 IPR000639 GO:0003824
Aip01g00810 316 PRINTS Epoxide hydrolase signature 132 145 IPR000639 GO:0003824
Aip01g00810 316 PRINTS Epoxide hydrolase signature 146 159 IPR000639 GO:0003824
Aip01g00810 316 PRINTS Epoxide hydrolase signature 282 304 IPR000639 GO:0003824
Aip01g00810 316 PANTHER SI:DKEY-122A22.2 2 309 - -
Aip01g00810 316 PANTHER - 2 309 - -
Aip01g00810 316 Pfam alpha/beta hydrolase fold 62 171 IPR000073 -
Aip01g00810 316 Gene3D alpha/beta hydrolase 53 309 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00810 Aip-Chr1 14150958 14154958 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00810 64 294 Miscellaneous Gene Families AT1G80280 23.019 3.57e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00810 - - gmx:100816070 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00802 05 10674311 10696362 Aip01g00810 01 14150958 14154958 PCT