Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00779 ATGTGTCCGGGACAAGAAACAAACGTGCAATGCCAGTGCCAAAGAGCCATGAAAGATGGTAGTAGCCACAATAATGAGGACTATAGTCATACAAAGTTTAACAACTATGCTTGTGCTTGTGTGGTAGCTGCCTCTATTATCTCTGCTATATTTGGCTATTCTACAGGAGTGATGGCAGGAGCATTGTTATACATAAAGGAAGAACTAGAAATCAGTGATCTACAGGTTCAATTGCTAGCAGGAATCTTGAATGCATGTGCATTACCAGGATCCTTGCTGGCAGGAAGAATCTCTGATATCATAGGACGGAGAAACACCATCATCCTCTCTTCCATCATCTTCTTGTTGGGGTCCATTCTGATGGGGTACGGTCCAAACTACTCAGCATTGATGGCTGGAAGATGCACGGCGGGTATTGGTGCGGGTTTTGCCCTCATGATTGCACCAGTTTACAGCGCTGAGATCTCTTCTCCTTCCTACAGAGGCTTCCTAACCGCTCTCCCTGACGTGTCCATCAACTTGGGTCTCTTATTTGGCTACGTCTCTAACTACTTCTTCGGTCGCTTGCCCCTTCGAATTGGCTGGAGAACCATGCTTTTTGTTCCTGCATTCCCTTCTCTGGCTCTGGCCATTCTCATGCTCAAGCTTGTTGAGTCGCCAAGGTGGCTGGTGATGCAAGGGCGTATTGGTGATGCGAGGGAGGTTCTGATGCGCGTGTCAAACACGAAGCAAGAAGCAGAGCAACGGTTGCAAGAGATAAAAACCGCCGCAGGCATCGATCCAAGAAGCACACAAGACATTGTCCAAGTGCCAAAGAGGAGTCGAAGTGGCGGAGGAGCGCTCCGAGAGCTTCTATGCAACCCGTCGCCGCCTGTTCGGCGAATCCTAATCGCAGCCACCGGCGTCCATTTGTTCCAGCAAATCATAGGGATAGAGGCCATTTTCATGTACACTCCAAGAATCTTTGAGAGAACAGGAATCACTGATAAGAGCGTGTTGTTACTAGCAACTGTTGGAATGGGAATCAGCGATGCCGTTTTCGTGTTGATATCAACATTCTTGTTGGACAGAGTTGGAAGAAGGATCTTGTTGCTGGTTAGTTCTGGTGGTGTTGCTGTGTCTCTTCTAGGCTTAGGTGCATGCATGAGAATAGTGGAGCATTCAGATGACAAGGTTTCTTGGGCAATAAGTTTCACCATTGTATTCACTTACATCTATGTGGCTTTCACTGCAATAGGCCTTGGACCTGTTACATGGGTGTATAGCTCAGAGATTTTTCCACTCAGGTTGAGAGCACAGGGTCTTGGTGTGGGTGTCACTGTCAACAGGTTCACAAATGTTGTGGTGGTTACAAGTTTCATTTCAATTTATCAGAAGATTACAATGGCTGGGATTTTCTTTATGTATACTGCTATCACAGCTTTGGCTTGGTGCTTCTATTATTCCTTCTTGCCTGAAACCAAAGGTAGGTCTTTAGAGGACATGGAGAGTATATTTGGGAAAACTAATGACATCAATAATAATAAGCAAGTGAAGCATGTCATCAATGGCTACAACAATGCATAG 1566 0.4591 MCPGQETNVQCQCQRAMKDGSSHNNEDYSHTKFNNYACACVVAASIISAIFGYSTGVMAGALLYIKEELEISDLQVQLLAGILNACALPGSLLAGRISDIIGRRNTIILSSIIFLLGSILMGYGPNYSALMAGRCTAGIGAGFALMIAPVYSAEISSPSYRGFLTALPDVSINLGLLFGYVSNYFFGRLPLRIGWRTMLFVPAFPSLALAILMLKLVESPRWLVMQGRIGDAREVLMRVSNTKQEAEQRLQEIKTAAGIDPRSTQDIVQVPKRSRSGGGALRELLCNPSPPVRRILIAATGVHLFQQIIGIEAIFMYTPRIFERTGITDKSVLLLATVGMGISDAVFVLISTFLLDRVGRRILLLVSSGGVAVSLLGLGACMRIVEHSDDKVSWAISFTIVFTYIYVAFTAIGLGPVTWVYSSEIFPLRLRAQGLGVGVTVNRFTNVVVVTSFISIYQKITMAGIFFMYTAITALAWCFYYSFLPETKGRSLEDMESIFGKTNDINNNKQVKHVINGYNNA 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00779 521 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 27 502 IPR045262 GO:0015144
Aip05g00779 521 Pfam Sugar (and other) transporter 41 499 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aip05g00779 521 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 27 502 - -
Aip05g00779 521 Gene3D MFS general substrate transporter like domains 29 503 IPR036259 -
Aip05g00779 521 Coils Coil 229 256 - -
Aip05g00779 521 ProSiteProfiles Major facilitator superfamily (MFS) profile. 40 488 IPR020846 GO:0022857
Aip05g00779 521 PRINTS Sugar transporter signature 48 58 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip05g00779 521 PRINTS Sugar transporter signature 131 150 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip05g00779 521 PRINTS Sugar transporter signature 306 316 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip05g00779 521 PRINTS Sugar transporter signature 400 421 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip05g00779 521 PRINTS Sugar transporter signature 423 435 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip05g00779 521 SUPERFAMILY MFS general substrate transporter 26 496 IPR036259 -
Aip05g00779 521 TIGRFAM SP: MFS transporter, sugar porter (SP) family 33 494 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip05g00779 521 ProSitePatterns Sugar transport proteins signature 1. 94 111 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00779 Aip-Chr5 10141749 10144359 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00779 34 504 Organic Solute Cotransporters AT4G36670 54.352 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00779 - - adu:107487833 965.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00779 05 10141749 10144359 Aip05g00779 05 10141749 10144359 ECH
Aip03g00716 03 6893709 6896203 Aip05g00779 05 10141749 10144359 ECH