Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00716 ATGATGAATATGGGAAAAGAAGAAGTTGAAGCAGAGAGCAAGAACAGGAGCCTTGAGGATTTCGATCCACAAAAGAAGCCTAAGCGAAACAACTATGCTTTTGCTTGTGCCACTTTGGTTTCCATGACTACCATCTTGCTTGGTTACGACATTGGGGTTATGAGTGGAGCAGCAATGTACATACAAAGAGACTTGAAGATATCAGATGTGAAAATTGAGATTCTGCTGGGAATCATAAACTTGTATTCTCTAGTAGGGTCATGCCTCTCGGGAAGAACCTCCGACTTGATTGGTCGTCGTTACACCATAGCGCTTGCCGGCGCAATCTTATTCGCCGGAGCCATATTGATGGGCTTCTCTCCCAACTATGCATTCCTTATGTTTGGCCGTTTTATTGCTGGTATTGGCATCGGCTACGGCGCCGTCGTTGCTTCCGTCTACATCGCCGAAATCTCCCCTGCTTCCTCCCGTGGATTCCTCACCTCATTCCCTGAGGTATTCATAAACGGAGGGATATTACTGGGATACATTTCAAACTTTGCATTCTCAAAGATGAAACTCCAAGTCGGTTGGAGAATGATGCTCGGAATCGGAGCTATACCTGCTATGGTTCTAGCTATTGGAGTCTTAGCTGTACCAGAGTCACCAAGGTGGCTCGTCATGAAGGGTCGCCTGGGCGAAGCAACAAAAGTGCTAAACAAAACCTCCGACACAAAAGAAGAAGCACAACAACGCTTATCAGACATCAAAAGAGCCGCGGGAATCGCACAAGACTGCAACGACGACGTCGTTCAGGTCGCAAAGCAGAACATCGGCCAGGGTGTATGGAAGGAGCTTTTCCTCTACCCTACACCCGCGGTTCGCCACATTCTAATCGCAGCCCTTGGTCTACACTTCTTCCAACAATCTTCTGGCATCGACGCCGTTGTTTTGTACAGCCCGCGAATATTCGAGAAGGCTGGGATCAACAGCGACACGGAGACACTACTTGCAACTGTGGCCGTTGGGTTTGTTAAGACGGTTTTCATTTTGGTTGCCACGTTTACTTTGGACCGCGTGGGGAGGCGTCCCCTGTTACTCTGCAGTATCGGCGGAATGATGCTCTCGCTTCTCACGCTCGCTACCAGCCTCACGATCATTGATCACTCGGATCACAAGGTGACCTGGGCCGTTGGATTGAGCCTTGCCACTGTGTTGTCTTTTGTGGCCACGTTCTCGATTGGTGCGGGGCCCATGTGGTCGGTTTATTGCTCTGAGATCTTTCCGTTGAGGCTGAGGGCGCAGGGTACGGCTGCGGGCGTTGTGGTAAATAGGGTCACGAGTGGGGTTGTCACAATGACGTTTTTGTCCCTCTCCAAGGCCATTACTATTGGGGGCGCGTTTTTCCTCTTTTCGGGGATTGCCATGCTTGGCTGGATATTCTTCTATACCATGCTCCCTGAAACGAGGGGCAAGACCCTTGAGGAAATGCAAGGGTCTTTTGGTAAATTCTGGGAAAAACCCAATTCCACGGAGGTTGATGGTGGTAACGCCCAAGTTCAGCTAGGATAA 1551 0.4977 MMNMGKEEVEAESKNRSLEDFDPQKKPKRNNYAFACATLVSMTTILLGYDIGVMSGAAMYIQRDLKISDVKIEILLGIINLYSLVGSCLSGRTSDLIGRRYTIALAGAILFAGAILMGFSPNYAFLMFGRFIAGIGIGYGAVVASVYIAEISPASSRGFLTSFPEVFINGGILLGYISNFAFSKMKLQVGWRMMLGIGAIPAMVLAIGVLAVPESPRWLVMKGRLGEATKVLNKTSDTKEEAQQRLSDIKRAAGIAQDCNDDVVQVAKQNIGQGVWKELFLYPTPAVRHILIAALGLHFFQQSSGIDAVVLYSPRIFEKAGINSDTETLLATVAVGFVKTVFILVATFTLDRVGRRPLLLCSIGGMMLSLLTLATSLTIIDHSDHKVTWAVGLSLATVLSFVATFSIGAGPMWSVYCSEIFPLRLRAQGTAAGVVVNRVTSGVVTMTFLSLSKAITIGGAFFLFSGIAMLGWIFFYTMLPETRGKTLEEMQGSFGKFWEKPNSTEVDGGNAQVQLG 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00716 516 SUPERFAMILY MFS general substrate transporter 22 491 IPR036259 -
Aip03g00716 516 MobiDBLite consensus disorder prediction 1 25 - -
Aip03g00716 516 ProSitePatterns Sugar transport proteins signature 2. 132 157 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aip03g00716 516 Gene3D MFS general substrate transporter like domains 26 496 IPR036259 -
Aip03g00716 516 Pfam Sugar (and other) transporter 37 492 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aip03g00716 516 Coils Coil 225 252 - -
Aip03g00716 516 TIGRFAM SP: MFS transporter, sugar porter (SP) family 24 490 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip03g00716 516 ProSitePatterns Sugar transport proteins signature 1. 90 107 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aip03g00716 516 ProSiteProfiles Major facilitator superfamily (MFS) profile. 36 483 IPR020846 GO:0022857
Aip03g00716 516 PRINTS Sugar transporter signature 44 54 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip03g00716 516 PRINTS Sugar transporter signature 127 146 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip03g00716 516 PRINTS Sugar transporter signature 301 311 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip03g00716 516 PRINTS Sugar transporter signature 395 416 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip03g00716 516 PRINTS Sugar transporter signature 418 430 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip03g00716 516 PANTHER SUGAR TRANSPORTER 18 511 - -
Aip03g00716 516 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 18 511 IPR045262 GO:0015144
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00716 Aip-Chr3 6893709 6896203 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00716 19 516 Organic Solute Cotransporters AT3G18830 67.723 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00716 - - gmx:100800461 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00716 03 6893709 6896203 Aip03g00716 03 6893709 6896203 ECH
Aip03g00716 03 6893709 6896203 Aip05g00779 05 10141749 10144359 ECH