Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00711 ATGGTTTTTCTCTTTAACTATTTCCCCTTCCTTTTCCCCATTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGGCGCCGCATCACGGAGACCAGTATTCCTTCGCCCTCGAGTACGACGGCCCGCCGCTCCCCTTCGATCTCCCCCGGGCGGTTCCCATCAGCGTCGACGACATTCCGGTAGCTTCCGTCGTCTCTCAAGTACCTCTCTCCGATACTCTCTCTTTACCCGTTGTGCAACCAATCGTGGCGCCCAAAAACCCCACCGTTAAATTCTCTAAGGAGCTCCGGACTCTCGGCTCCGAAGCTAGGGTTTCCAAGGAGGTCGAGTTAGGTTCGGAGAGAACGGTGTCTCCCACCTCTGTCATCGCCTTCGAGGACAGAGTTTCGCAGAGCAACAACGTCTGTGAGCTCTCGGGTGAGTTGAGTAGCTCCGGTGCGTTCGAGTTCTCTAACGTGAACTATGCCTCCGGCGAGTTTTCCGATGAGGGTGGGAGTTCCAGGATGCTGGAGGAATCGAGGGGAGCTGGAAGCTCCGGCACTGTGGAGTTTTGCGAGAGTTTTGACAAGTCAGGGAGAAGCTCGAGTGCGTTGAGGGTTTCGAACGAGTTGCATCAGCACGAATGGGCCTCCACTGAGTCTGTTCTGAGTTTGGAGTACCCTTCCACTCGGGTTTCTTCCCTGAAGGCTGAGGATTGTGGTGATGCTAGGCGCCCCCCTGTTGTTACCTTCGATGTGGATTCTGATGATGCTTTGGATGGGGATTTTGGTGGTGAGGAGGAAGCTGTGACTAGACCTCTTAAGAGGGAGCCTCTCACAAAGGGGAAGAAAGGGTCTTGCTATAGATGCTTCAAGGGGAATAGATTCACAGAGAAGGAGGTTTGCCTTGTCTGTGATGCAAAGTATTGTAGTAATTGTGTGCTCCGAGCTATGGGGTCCATGCCGGAGGGTAGGAAATGTGTTGCCTGTATTGGATTCCCCATCGATGAGTCAAAACGAGGGAATTTAGGGAAATGCTCACGGATGCTCAAGCGATTGCTTAATGAATTGGAGGTTCGGCAGATAATGAAGGCGGAGAAGTTTTGTGAAGTGAATCAGCTTCCACCTGAATATATTTTTGTTAATGGGAAGCCCCTTGCGTATGAGGAGCTGGTTACCTTGCAGAACTGTCCAAACCCTCCAAAGAAGCTGAAGCCTGGAAACTATTGGTATGACAAAGTGTCTGGTCTTTGGGGGAAGGAAGGGCAAAAGCCTTCCAGGATTATCAGTCCCCATCTGAATGTTGGAGGCCCCATCCAGCCTGATGCTAGCAATGGAAACACTCAAGTTTTCATCAATGGTCGGGAAATAACAAAAGTAGAGCTTCGGATGTTGCAGTTGGCAGGAGTTCAATGTGCTGGTAACCCACATTTTTGGGTCAATGAGGATGGTTCATACCAAGAAGAGGGACAGAAGAATACACGAGGGTATATATGGGGAAAGGCTGGAACCAAGCTTGTATGTGCTTTCCTGTCCCTTCCAGTACCTTCTAAATCTTCAAATTCTTATGGAGAACAACACTCCAACCTGTCTAGCAAAGCAGTTCCTGACTACCTTGACCACGCAATAATTCAGAAGCTTCTCTTAGTTGGTTGTAGTGGATCTGGAACAAGTACCATTTTCAAGCAGGCCAAGATTCTGTACAACAGTGTCCCCTTCTCAGATGATGAGCGTGAAAATATAAAGTTAACCATCCAGAGCAATGTCTATGCCTATCTTGGCGTACTCCTGGAGGGTCGTGAGCGTTTTGAAGACGAATGTTTGGGGCATTTAAAGAAATGGCAGTCTTCTACTCCTGGTAACACAGGGCCTGGACCAGAATCTGATGAGAAGACGATGTATTCCATTGGTACAAGGCTGAAAGTATTCTCTGATTGGTTGCTGAAAACTATGGTATCGGGCAAACTTGATGCCATCTTTCCAGCTGCTACACGCGAATATGCGCCATTGATTGAGGAGTTGTGGAATGATGCAGCCATTAAGGCCACATATGCAAGAAGAAGTGAACTAGAAATGTTGCCTAGTGTCGCGAATTATTTCTTAGAGCGGGCTGTTAAGATATTGAGGACTGATTATGAACCCTCGGATTTGGATATCCTCTATGCTGAGGGAGTTACTTCATCCAATGGTCTGGCTTGTGTGGAGTTTTCATTTCCCCAATCATCTCCTGAGGAAACTGGTGAAACTGCTGATCTACATGATTCATTGATTAGGTATCAACTTATTAGGGTGCATGCAAGGGGGCTAGGAGAAAATTGCAAGTGGTTGGAGATGTTTGAGGATGTTGGAATGGTCATTTTCTGTGTTTCCTTGAGTGACTATGATCAGTTTACCGTTGATGGAAATGGTTGTTCCACTAATAAGATGGTATTAAGTAGGAAGTTTTTCGAAGCCATTGTCACTCACCCAACTTTTGAGCATATGGACTTCTTATTGATATTAAACAAAGTTGATCAGTTTGAGGAGAAGATCGAACAAGTTCCGTTGACCAAGTGTGATTGGTTCTCTGATTTTCATCCAACAATTAGCCGACCTCGGCCCAATAGCAACAGTAACAGCATCAATCACAACCCCTCCCTTGGTCAGCTGGGTTCTCATTACATAGCGGTTAAGTTCAAGAGGCTTTATTCATCTCTTACAGGGAGAAAGTTGTACGTGTCTGTGGTGAAGGGCTTGGAGCCTGGTAGTGTTGATGCAGCACTTAAATATGCAAAGGAAATTTTGAAGTGGAGCGAGGAGAGACCAAACTTTAGCTCCAATATTAAACTGATAAGAACAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAAGTTTCTTTTTGGTTGAATCCAACGCCGCTCAGTCCCAATTTGATTCACCCTCCGTCAATCTCTTTGCTGCAGAAGAAGCATGAACTTTGTAAATGCTTAGCAGCGTGCTTTTACATGTTTGCTTGTTTAAGCTTGTAG 3105 0.4464 MVFLFNYFPFLFPIFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPHHGDQYSFALEYDGPPLPFDLPRAVPISVDDIPVASVVSQVPLSDTLSLPVVQPIVAPKNPTVKFSKELRTLGSEARVSKEVELGSERTVSPTSVIAFEDRVSQSNNVCELSGELSSSGAFEFSNVNYASGEFSDEGGSSRMLEESRGAGSSGTVEFCESFDKSGRSSSALRVSNELHQHEWASTESVLSLEYPSTRVSSLKAEDCGDARRPPVVTFDVDSDDALDGDFGGEEEAVTRPLKREPLTKGKKGSCYRCFKGNRFTEKEVCLVCDAKYCSNCVLRAMGSMPEGRKCVACIGFPIDESKRGNLGKCSRMLKRLLNELEVRQIMKAEKFCEVNQLPPEYIFVNGKPLAYEELVTLQNCPNPPKKLKPGNYWYDKVSGLWGKEGQKPSRIISPHLNVGGPIQPDASNGNTQVFINGREITKVELRMLQLAGVQCAGNPHFWVNEDGSYQEEGQKNTRGYIWGKAGTKLVCAFLSLPVPSKSSNSYGEQHSNLSSKAVPDYLDHAIIQKLLLVGCSGSGTSTIFKQAKILYNSVPFSDDERENIKLTIQSNVYAYLGVLLEGRERFEDECLGHLKKWQSSTPGNTGPGPESDEKTMYSIGTRLKVFSDWLLKTMVSGKLDAIFPAATREYAPLIEELWNDAAIKATYARRSELEMLPSVANYFLERAVKILRTDYEPSDLDILYAEGVTSSNGLACVEFSFPQSSPEETGETADLHDSLIRYQLIRVHARGLGENCKWLEMFEDVGMVIFCVSLSDYDQFTVDGNGCSTNKMVLSRKFFEAIVTHPTFEHMDFLLILNKVDQFEEKIEQVPLTKCDWFSDFHPTISRPRPNSNSNSINHNPSLGQLGSHYIAVKFKRLYSSLTGRKLYVSVVKGLEPGSVDAALKYAKEILKWSEERPNFSSNIKLIRTDTTLDLSQKAEKVSFWLNPTPLSPNLIHPPSISLLQKKHELCKCLAACFYMFACLSL 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00711 1034 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 71 970 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Aip05g00711 1034 PANTHER EXTRA-LARGE GTP-BINDING PROTEIN 71 970 - -
Aip05g00711 1034 Pfam G-protein alpha subunit 575 955 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Aip05g00711 1034 CDD G-alpha 576 961 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Aip05g00711 1034 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 576 959 IPR027417 -
Aip05g00711 1034 Gene3D - 577 949 IPR027417 -
Aip05g00711 1034 Gene3D - 611 756 IPR011025 GO:0007165
Aip05g00711 1034 PRINTS Alpha G protein (transducin) signature 577 592 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Aip05g00711 1034 PRINTS Alpha G protein (transducin) signature 861 870 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Aip05g00711 1034 PRINTS Alpha G protein (transducin) signature 813 841 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Aip05g00711 1034 ProSiteProfiles G-alpha domain profile. 574 975 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Aip05g00711 1034 SUPERFAMILY Transducin (alpha subunit), insertion domain 604 753 IPR011025 GO:0007165
Aip05g00711 1034 SMART galpha_1 564 943 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00711 Aip-Chr5 8981486 8987308 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00711 - - aip:107642810 1827.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00711 05 8981486 8987308 Aip05g00711 05 8981486 8987308 ECH
Aip05g00711 05 8981486 8987308 Aip01g00854 01 15512179 15517189 PCT