Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00854 ATGGCGCATCCGATGCCGGCGCCGGCGAACTGCAGCACGAGATTCTCCAAGGAGCTCAAACCGTACGGCACAGAACCAGCGTCTTCTCCTGCTTCCATGAGAGCTTTCAACCGAAGCAGCAACGCCGGTTCCGGCGACGGCAATACCACCGTGTCTCCGACCTCTGTGATCGCCTTCGAACACGGCGCCGGTCGGAGCAACGACGCGGGCGAGTTCAGCAGCGAGGAACACTCGCACGAGTTGAGAAACTTGCATGGCGTGAAGGAGAGTTCAGATTTCAACGATTCAAATTGGGCGTTCACCGATTCCTTATTGAGTTTGGATTTCGAATCGTCTAGAAACAAAGGTTTGTGCTACCGGTGTTTCAAGGGTAGCAGGTTCACGGAGAAAGAGGTGTGTCTGGTTTGTTCTGCAAAGTATTGTGGGAATTGCGTGCTTGATGCTATGGGTTCAATGCCTGAAGGAAGAAAGTGTGTTGATTGTATTGGTTATCCAATTGATGAGTCTAAAAGAGAGAGTTTAGGGAAGTGCTCTAGGATTTTCAGGAGGTTGCTTAATGAGTTGGAGGTTCGGCAGATAATGAAGGCTGAGAGGTTTTGTGAGGTGAATCAACTTCCTCCGGAGTATATTTGTGTCAATGGGAGGCCACTTTCGTTTGAGGAACTGGTTACGTTGCAGAACTGCGCTGCTCCTCCGAAGAAGCTTAAGCCGGGGAGTTATTGGTATGATAAAGTATCTGGTCTTTGGGGAGAGGAAGGACAGAAGCCTTGCAGAATTATCAGTCCCCATCTGAATGTTGGGGGTCCAATCAAGCCGGATGCTAGCAATGGGAACACGCAGGTTTACATCAATGGCAGGGAAATAACAAAAGTCGAGCTCCGAATGTTGCAGTTGGCAGGAGTTCAATGCGCTGGTAACCCACATTTTTGGGTTAATGAGGATGGTTCATACCAAGAAGAGGGACAGAAAAATATAAGAGGGAATATATGGGGAAAGTCTGGAACGAAGCTTGTATGTGCTTTACTGTCCCTGCCAGTTCCTTCTAAATGTTCAATTTTGTGTGGGGAACGAACCTCCAGTCCAGTTAGCAAAAGAGTTCCTGATTACCTTGAGCATGGAATAGTTCAGAAGCTCCTCTTAGTTGGCTATGGTGGATCTGGAACAAGTACTATTTTTAAGCAGGCCAAGATACTTTACAAAGACATCCCTTTCTCAAAAGAAGAACGTGAAAGTATAAAGTTGACCATTCAAACGAACGTATATTCCTATATTGGCTTACTACTTGAAGGTCGTGAGCGTTTTGAGGAAGAAAGTCTGTGGAATATGAAGAAAAGACAATCTGATGTACTTGATTCTTCTACAGGAGTCAGTTCAAACAACAAGACAATCTATTCCATTGGCACAAGGCTAAAAGCTTTCTCTGATTGGCTGCTGAGAACTATGGCTTCGGGCAAACTTGATGCCATCTTTCCTGCAGCTACTCGTGAATATGCACCATTGATTGAGGAGATGTGGAGTAGTGCAGCCATTAAGGCTACCTACAAAAGAAGAAGAGAAATAGAAATGCTACCAAGTGTTGCTAGTTATTTCTTAGAGCGGGTTGTTGAGATATTGAGGGCTGATTATGAGCCATCAGATTTAGATATTCTCTATGCTGAAGGAGTTACTTCATCCAATGGACTGGCTTGTGTGGAGTTCTCATTTCCCCCATCAGCTCCTGAGGAAACTGTTGATACCATCGGTTTACATGATTCTTTTGCTAGGTATCAACTAATTACAGCGCATGCAAGAGGAATAGGAGAAAATTGCAAGTGGCTAGAGATGTTAGAGGATGTTGGCATGGTCGTCTTCTCTGTTGCCTTGAGTGACTACGATCAATTTTCTGCCGAAGGAAATGGTTGCATCACTAACAAGATGTTATCAAGCAGGAAGCTTTTTGAAACCATTGTTACTCATCCAACTTTTGAGAAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGA 2022 0.4407 MAHPMPAPANCSTRFSKELKPYGTEPASSPASMRAFNRSSNAGSGDGNTTVSPTSVIAFEHGAGRSNDAGEFSSEEHSHELRNLHGVKESSDFNDSNWAFTDSLLSLDFESSRNKGLCYRCFKGSRFTEKEVCLVCSAKYCGNCVLDAMGSMPEGRKCVDCIGYPIDESKRESLGKCSRIFRRLLNELEVRQIMKAERFCEVNQLPPEYICVNGRPLSFEELVTLQNCAAPPKKLKPGSYWYDKVSGLWGEEGQKPCRIISPHLNVGGPIKPDASNGNTQVYINGREITKVELRMLQLAGVQCAGNPHFWVNEDGSYQEEGQKNIRGNIWGKSGTKLVCALLSLPVPSKCSILCGERTSSPVSKRVPDYLEHGIVQKLLLVGYGGSGTSTIFKQAKILYKDIPFSKEERESIKLTIQTNVYSYIGLLLEGRERFEEESLWNMKKRQSDVLDSSTGVSSNNKTIYSIGTRLKAFSDWLLRTMASGKLDAIFPAATREYAPLIEEMWSSAAIKATYKRRREIEMLPSVASYFLERVVEILRADYEPSDLDILYAEGVTSSNGLACVEFSFPPSAPEETVDTIGLHDSFARYQLITAHARGIGENCKWLEMLEDVGMVVFSVALSDYDQFSAEGNGCITNKMLSSRKLFETIVTHPTFEKXXXXXXXXXXXXXXXX 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00854 673 PANTHER EXTRA-LARGE GTP-BINDING PROTEIN 113 658 - -
Aip01g00854 673 SMART galpha_1 356 669 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Aip01g00854 673 ProSiteProfiles G-alpha domain profile. 374 673 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Aip01g00854 673 PRINTS Alpha G protein (transducin) signature 612 640 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Aip01g00854 673 PRINTS Alpha G protein (transducin) signature 377 392 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Aip01g00854 673 Pfam G-protein alpha subunit 377 657 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Aip01g00854 673 Gene3D - 405 553 IPR011025 GO:0007165
Aip01g00854 673 MobiDBLite consensus disorder prediction 1 55 - -
Aip01g00854 673 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 376 657 IPR027417 -
Aip01g00854 673 SUPERFAMILY Transducin (alpha subunit), insertion domain 404 552 IPR011025 GO:0007165
Aip01g00854 673 MobiDBLite consensus disorder prediction 30 55 - -
Aip01g00854 673 Gene3D - 575 660 IPR027417 -
Aip01g00854 673 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 113 658 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00854 Aip-Chr1 15512179 15517189 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00854 - - aip:107626175 1263.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00711 05 8981486 8987308 Aip01g00854 01 15512179 15517189 PCT