Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00608 ATGGACGTGGGATCAACCGGCGACACCTCCGCTGACTATTTCTCACCGGATGGCGCCATATCGCGATGGAAATTCACGGTGTCGAGGAAGTACCAACATTTCCTCGACAAGACCACGCCGCACATGCTCCGCCGCTGGATTGGTTCCTTGATCATCGCTTGTATCTACGTTCTGCGCGTATACTTGATCCAAGGCTTCTACGTCGTCTCCTACGGCCTCGGAATCTACATGCTCAACCTCCTCATCGGCTTCCTTTCCCCTCAGGTTGATCCCGGAATTCAGGAACTCTACGACGGTGCCACTCTCCCCACCAGGGGCTCCGATGAGTTCCGTCCCTTCGTTCGCCGCCTCCCTGAGTTCAAGTTCTGGTATTCAATCACGAAGGCATTTTGCATTGCCTTTGTGATGACTTTCTTTAGTGTGTTTGATGTTCCAGTGTTTTGGCCAATACTCCTTTTCTACTGGGTAGTCTTATTCACACTTACCATGAGAAGACAGATATCACATATGATCAAATACAAATATGTGCCATTCTCATTTGGGAAACAGCGCTATGATGGAAAGAAAGCATCGGCTGAAAGCGCAGGCCATTCAATGGACTAA 603 0.4959 MDVGSTGDTSADYFSPDGAISRWKFTVSRKYQHFLDKTTPHMLRRWIGSLIIACIYVLRVYLIQGFYVVSYGLGIYMLNLLIGFLSPQVDPGIQELYDGATLPTRGSDEFRPFVRRLPEFKFWYSITKAFCIAFVMTFFSVFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRYDGKKASAESAGHSMD 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00608 200 PANTHER PROTEIN RER1 6 194 IPR004932 GO:0016021
Aip05g00608 200 Pfam Rer1 family 24 185 IPR004932 GO:0016021
Aip05g00608 200 PIRSF AtER_Rer1p 6 196 IPR004932 GO:0016021
Aip05g00608 200 PANTHER PROTEIN RER1C 6 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00608 Aip-Chr5 7471067 7472933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00608 29 198 Miscellaneous Gene Families AT2G21600 76.471 1.68e-95 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00608 - - ahf:112799570 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00608 05 7471067 7472933 Aip05g00608 05 7471067 7472933 ECH
Aip03g00753 03 7240632 7243382 Aip05g00608 05 7471067 7472933 ECH
Aip05g00608 05 7471067 7472933 Aip01g01005 01 20451229 20453174 PCT