Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00458 ATGGCCGTTCAAGCTCAATACCCATCCAATCTTCTCCTTCTCAACACAAACAACAGTAATAATAACGATGACTATTCTTCTGCCTTACAACCACCTCATCAACTCTCCCGTAAGAGACCAAGACAACCAACCCCAAATCCAAATCCAAATCCAAATAATCTCATGAATCAATTCAACCCTCCTCCTCCTCCTCCTCAACAACAACAGCATCAAAATCAAAATGTAGTCTCCACTGGCCTACGCTTATCCTTCTCTTCTCAACAAAGACTACAATGGCAGCAAACTTCTTCTCTATTATCCCAACAATTAGCAGACCAAATCAAACAACAGAGACACGAAATTGATCAATTCCTACAAGCACAGGGAGAGCAATTGCGCCGTTCATTAGCGGATAAGAGACACAACCATTTCCGCGCCCTCATAACCGCCGCCGAGGACACATTAGCGCGACGCTTGAGGGATAAAGAAACAGAGGTTCACAAAGCCACGCGCCGCAACGCTGAGTTAGAGGCACGCGCCGCGCATCTTACAGCCGAGGCTCAGCTTTGGCAGGCCAAGGCAAAAGCGCAGGAAGCCACCGCCGCTTCCTTGCAGGCGCAGCTCCACCACGCCATCATGAATGCCGCCGCCGGAGGAGGAGCCGGTGCTGCAGGTACGGCGGATGACGCCGCCGCGGGGGTAATGTCGTGCGCGGAGGACGCCGAGTCGGCCTACGTTGACCCGGAGCGAGTGGCGGCGGCAGGTCCAAGGTGCCGCGGGTGCGAGAGGCGCGTAGCGACGGTGGTGGTGCTGCCGTGTCGACACCTTTGCGTTTGCGGCGAATGCGAGAAGCATTTCCGTGCTTGCCCCGTTTGTCTCACCGTTAAAAATTCAACCGTTGAGGCCAAAATCGATAAGCTGGCCGTCCTCCTCCACCAAGCCGCCAGGAACAGCAACGACCTGTACGAGAGGCCGACGCGCCGGATCATCGAGGACACCGAGCAGGTGCCCGACAAGGCCCTCATCGTCGTCGTTAAATGTCGCGCCAACACCTTCATCAAGCGCCTCTTCACCATCATCCCCACCACCGCACTCAAAAAAATATCCATGCAGCTGGAAAACTCCATCGGCGACGTCCAGTGGCTCCTCCGTGTCTCCGCTTCCACAGACAAGCGCGACGACGAGTACCTCGGACTCCCTCCAATCGCCTCCAACGAGCCCATCCTCTGCCTCATCTGGGAACAAATCGCAAACCTCCTCTCAAACGGCTTCGTGGAGGAACGCTCCGACGCCGCAGCCTCCCTTGTTTCCCTGATTCGCGACAACGACCGTTACGGCAAACTCATCCTAGAAGAAGGCGGCGTTCGCCCTCTTCTCAATATAAaagaaaggagatttagCCTTATACTTGTCAAAGTTTGCAACATAAAATGTGGCTAA 1419 0.5405 MAVQAQYPSNLLLLNTNNSNNNDDYSSALQPPHQLSRKRPRQPTPNPNPNPNNLMNQFNPPPPPPQQQQHQNQNVVSTGLRLSFSSQQRLQWQQTSSLLSQQLADQIKQQRHEIDQFLQAQGEQLRRSLADKRHNHFRALITAAEDTLARRLRDKETEVHKATRRNAELEARAAHLTAEAQLWQAKAKAQEATAASLQAQLHHAIMNAAAGGGAGAAGTADDAAAGVMSCAEDAESAYVDPERVAAAGPRCRGCERRVATVVVLPCRHLCVCGECEKHFRACPVCLTVKNSTVEAKIDKLAVLLHQAARNSNDLYERPTRRIIEDTEQVPDKALIVVVKCRANTFIKRLFTIIPTTALKKISMQLENSIGDVQWLLRVSASTDKRDDEYLGLPPIASNEPILCLIWEQIANLLSNGFVEERSDAAASLVSLIRDNDRYGKLILEEGGVRPLLNIKERRFSLILVKVCNIKCG 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00458 472 MobiDBLite consensus disorder prediction 42 68 - -
Aip05g00458 472 ProSiteProfiles Zinc finger RING-type profile. 251 285 IPR001841 -
Aip05g00458 472 SUPERFAMILY beta-sandwich domain of Sec23/24 31 112 - -
Aip05g00458 472 MobiDBLite consensus disorder prediction 13 75 - -
Aip05g00458 472 Coils Coil 100 120 - -
Aip05g00458 472 Coils Coil 152 200 - -
Aip05g00458 472 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 232 295 IPR013083 -
Aip05g00458 472 PANTHER ARMADILLO REPEAT ONLY 1 292 455 - -
Aip05g00458 472 PANTHER ARMADILLO REPEAT ONLY 4 292 455 - -
Aip05g00458 472 Pfam Zinc finger, C3HC4 type (RING finger) 250 287 - -
Aip05g00458 472 MobiDBLite consensus disorder prediction 13 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00458 Aip-Chr5 5131347 5135631 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00458 - K19042 gmx:100779548 259.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00458 05 5131347 5135631 Aip01g01274 01 35831093 35832555 PCT