Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00331 ATGAAGTTTTGCAATTTCTTTGCATTCACCTTGGCTTTAATAGTACTACTTCAAGCCTTAGGTGCAAGTGCGGACGATGCTGGAACCATAATCACTCAGCCTCTCTATAATGAATTCCTGAAGCACTTAACCGATTCCAGATGCGAAGCCCATGGCTTCTACACCTACAATGCTTTTGTCACCGCCGCCAGAGCATTTCCCGCCTTTGGAACAACCGGTGATGACGTCACTCGCAAGCGAGAACTCGCCGCCTTCTTCGGCCAAACATCACACGAGACAACAGGTACACACATTAGAGGAACGGCTAATGCTGCAGATGAATTTGAATGGGGTTATTGCTTTTTGAGGGAACAGACTAAAGAACAGCACTGTGATTCTACACAAGCACCATGCCCCGCTGGCAAGCAATATTATGGCCGTGGTCCCATTCAGCTTACAAGCAACTCCAACTATCAGCTAGCTGGACAAGCTATAAAGGCAGATTTGATAAACAATCCAGACTTGGTAGCAACAAATGCGGTAATATCATTCAAAACAGCTATATGGTTTTGGATGACACCACAAGGAAACAAGCCCTCGTGCCACGACGTCATCACCAACGCATGGAGGCCAACCGCCACTGACTCGGCGGCAGGTCGAGTCCCAGGCTACGGTGTCATCACCAACATAATCAACGGTGGGATTGAATGTGGGAAAGGTGCCAACACAAACTCCAATAACAGGATTGGATTTTACAAGAGGTACTGTGATATCTTGAAGATTGGCTATGGGAGTAACTTAGATTGTGCAAATCAACAGCACTTTTAA 807 0.4647 MKFCNFFAFTLALIVLLQALGASADDAGTIITQPLYNEFLKHLTDSRCEAHGFYTYNAFVTAARAFPAFGTTGDDVTRKRELAAFFGQTSHETTGTHIRGTANAADEFEWGYCFLREQTKEQHCDSTQAPCPAGKQYYGRGPIQLTSNSNYQLAGQAIKADLINNPDLVATNAVISFKTAIWFWMTPQGNKPSCHDVITNAWRPTATDSAAGRVPGYGVITNIINGGIECGKGANTNSNNRIGFYKRYCDILKIGYGSNLDCANQQHF 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00331 268 PANTHER CHITINASE (CLASS IB) / HEVEIN 22 268 - -
Aip05g00331 268 CDD chitinase_GH19 31 262 - -
Aip05g00331 268 Gene3D - 35 268 - -
Aip05g00331 268 PANTHER CHITINASE-RELATED 22 268 - -
Aip05g00331 268 PIRSF Endochitinase 3 268 IPR016283 GO:0004568|GO:0005975
Aip05g00331 268 Gene3D Endochitinase, domain 2 116 171 - -
Aip05g00331 268 ProSitePatterns Chitinases family 19 signature 2. 175 185 IPR000726 GO:0004568|GO:0006032|GO:0016998
Aip05g00331 268 SUPERFAMILY Lysozyme-like 28 268 IPR023346 -
Aip05g00331 268 Pfam Chitinase class I 30 262 IPR000726 GO:0004568|GO:0006032|GO:0016998
Aip05g00331 268 ProSitePatterns Chitinases family 19 signature 1. 48 70 IPR000726 GO:0004568|GO:0006032|GO:0016998
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00331 Aip-Chr5 3726082 3727874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00331 26 268 Glycoside Hydrolase AT3G12500 59.756 1.06e-102 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00331 K20547 - csv:101215333 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00331 05 3726082 3727874 Aip10g00097 10 889393 893648 PCT