Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00262 ATGATGCAGGTTGTGATCATTGCAGTTGCTGCAACAGTTGGGAATCTACTGATTGGATGGGATAGTTCAACCATTGCAGGGGGCATGACCTACATCAAGCAAGAGTTCAACTTGGAATCTGATCCCACACTTGAAGGGCTAATAGTATCTATGTCCTTCATAAGTGGCACCATCATGACTATATTTGCTGGCACGGTCTCTGATTTGCTTGGCAGACGCCCTATGCTGATAGTTTCATCCATTATGTTCTTCCTCAGTGGTTTGGTGATTCTCTGGGCTCCTAATGTTACTGTTATTCTGCTCTCAAGGATTTTAGATGGGGTTGCTATTTCGCTTGCCGTGACTCTTACTCCTCTTTACATATCGGAGGTAGCCCCGGCCGATATCAGAGGCCAATTGAACACCGTCACACAGTTTTCGTGTTCAGCTGGAATGTTTCTGGCTTACATCTTGGTTTTCTTGATGTCCCTGCTGTCTTCTCCTAGTTGGAGAACCATGCTTGGGGTTATATCTATTCCTTCTGTTGGCTATTTCTTGCTTGCCATGTTCTTCCTACCTGAGTCCCCTAGGTGGCTTGTTAGCAAAGGTCGAGTCCCCGAGGCTGAAAAAGTTCTGCGAAGACTTCGTGGGGTTGAAGACGTTTCAGGGGAGTTGGCTCTGCTTGCGGAGGGTCTTAGTCCTGGTGGCGAAGCCACTTCATTGGAAGAGTACATAGTTGCCCCAGCCAGTGAGGCTCTTGTTCACCAGGAAGCAGGGAAAGATTATATAAAGCTATATGGACCAAATGAGGGAGTGTCATTGGTTGCTCACCCAGTGAATGGACAGGGTAGCTTGATATCGCGCAGTATGTTGTCGCAGCAAGGAAGCTTTGTGTCTCAGGCTGCTGGCAGTCTTAAAGATCCTATTGTCAATCTCTTTGGGAGTTTGCATGAGAACACTCTCCCTGAGGGTGGAGGTTCGCGCAGCATGCTAATCCATAATGCAAACAGCATCTTTGGAGATTCCAGCCCCTTTGGTACCGGCGACAATCTGCATGCTCCACTAATGTCATTTCAAGGTGATGCTGGGGAGAGATCAAAGGACAACTTGGGTTTCAGGAGCACTAGCAGCCTGAGAAGCAGTTTCGCTCATGGGAATGCTGTGGAGACACCTAGAAATACAAACATCGGTGGAGGTTGGCAATTGGTTTATAAACCAGCTGATGATGGAAAAGGAGTGCAAAGGGTTTATTTGCATGCAGATCCTGCTGCACCGTCTCAAGAACAGCATGTTTCATTTGTTTCAGCTTCTGGGTATGACATGCCTGTAGATGTCGAAACTTATCAGGCTGCTGCTCTAGTCAGCCAGTCTGTTCTAGGTACTCATGATATGTTGAGTATGCCAGAAGTGGCTAAAAAAGGTCCAAACTGGAGAAATCTGCTAGAACCAGGTGTCAAGCGAGCATTGATTGTCGGAATAGGGCTTCAAATTCTTCAACAGGCTGCTGGTATAAATGGATTTCTATACTATGCTCCCCAAATTCTTGAACAAGCTGGGGTAGGAGCTCTTCTATCGAATTTGGGCATCAGTTCTACATCTTCTTCATTACTTGTAAATGTCATTACCACATTCTGTATGCTGCCTTGTATAGGTCTTTCCATCAAGCTCATGGATATTGCTGGCCGGAGGTCAATAATGTTGTACACAATCCCTGTTCTGATAGTTTGTCTCGTGATACTAGTAGTCCGGGAATCGTTTCAGATGGGTTCTGTCCTCAATGCAGCAATCACTGCTGTTAGTGTTGTGGTCTATGAAAGCTGCTTCTGCATGGGCTTTGGTGTTATTCCCAACATAATATGCGCCGAAATCTTCCCAACCAGTGTTCGCGGAATCTGCATTTCTATGACTTCACTCACATACTGGGTTTGTACCCTGATTGTCACTTCTACATTTCCCTATTTGCTCCAAATCCTCGGCCTCACTGGCGTCTTCGGATTATTCGTTGCCGGCTGCATCATTTCATGGATATTTGTATACTTGAAAGTTCCTGAAACAAAGGGCATGCCTTTGGAAGTCATTATTGAGTTCTTTGCAATTGGTGCAAAGCCTGGTACTGATCCTGCTACAATTGGAACAAAAGGTTGA 2124 0.4586 MMQVVIIAVAATVGNLLIGWDSSTIAGGMTYIKQEFNLESDPTLEGLIVSMSFISGTIMTIFAGTVSDLLGRRPMLIVSSIMFFLSGLVILWAPNVTVILLSRILDGVAISLAVTLTPLYISEVAPADIRGQLNTVTQFSCSAGMFLAYILVFLMSLLSSPSWRTMLGVISIPSVGYFLLAMFFLPESPRWLVSKGRVPEAEKVLRRLRGVEDVSGELALLAEGLSPGGEATSLEEYIVAPASEALVHQEAGKDYIKLYGPNEGVSLVAHPVNGQGSLISRSMLSQQGSFVSQAAGSLKDPIVNLFGSLHENTLPEGGGSRSMLIHNANSIFGDSSPFGTGDNLHAPLMSFQGDAGERSKDNLGFRSTSSLRSSFAHGNAVETPRNTNIGGGWQLVYKPADDGKGVQRVYLHADPAAPSQEQHVSFVSASGYDMPVDVETYQAAALVSQSVLGTHDMLSMPEVAKKGPNWRNLLEPGVKRALIVGIGLQILQQAAGINGFLYYAPQILEQAGVGALLSNLGISSTSSSLLVNVITTFCMLPCIGLSIKLMDIAGRRSIMLYTIPVLIVCLVILVVRESFQMGSVLNAAITAVSVVVYESCFCMGFGVIPNIICAEIFPTSVRGICISMTSLTYWVCTLIVTSTFPYLLQILGLTGVFGLFVAGCIISWIFVYLKVPETKGMPLEVIIEFFAIGAKPGTDPATIGTKG 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00262 707 Gene3D MFS general substrate transporter like domains 442 692 IPR036259 -
Aip05g00262 707 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip05g00262 707 PRINTS Sugar transporter signature 100 119 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip05g00262 707 PRINTS Sugar transporter signature 492 502 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip05g00262 707 PRINTS Sugar transporter signature 591 612 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip05g00262 707 PRINTS Sugar transporter signature 614 626 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip05g00262 707 ProSitePatterns Sugar transport proteins signature 1. 63 80 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aip05g00262 707 ProSitePatterns Sugar transport proteins signature 1. 546 562 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aip05g00262 707 SUPERFAMILY MFS general substrate transporter 9 684 IPR036259 -
Aip05g00262 707 Gene3D MFS general substrate transporter like domains 2 248 IPR036259 -
Aip05g00262 707 PANTHER - 1 703 - -
Aip05g00262 707 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 1 703 - -
Aip05g00262 707 Pfam Sugar (and other) transporter 451 687 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aip05g00262 707 Pfam Sugar (and other) transporter 8 221 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aip05g00262 707 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 679 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00262 Aip-Chr5 2837326 2840755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00262 51 707 Organic Solute Cotransporters AT3G51490 52.624 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00262 - - gmx:100789093 1100.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00262 05 2837326 2840755 Aip05g00262 05 2837326 2840755 ECH
Aip03g00811 03 7851814 7854587 Aip05g00262 05 2837326 2840755 ECH