Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02874 ATGGCTTTCAATTTGATTCTATGGTATCAACCCAATTTGGTTCTTATTGTTTTTGTGCTCTTTTCATGCTCCTTTTGTGTGTTCTCTTCAACTGATGAAGCTGGTGGCAGTGGCGAAACCTTTACTGTTTCGAGCTTCAGCTACCCTGAGACTAGGCTCAGACCCTTTGATTTGCGTTATATCAGAGTTGACTTGCCGCCATGGTTCTCTGTGCTGTCTATAGCATTGAACTCAAATGTAGACCTTGATATCTCAAGAATTGAAACGGCTTCACAAAGTATGTTGCCGATCATATGCTTTAGAGATGGAAGTCCTCCACTGCCAGATGCCTTAAACATATCAATGACGAATTCAGCAATCTCAGGGATAAATGGTCTTGATGTAGAGCAGTGTTTTCCAATGCAGAAAAATATCACTATGACATTGACAAACAATCAGATATCTCCAGGTGTTTGGTACATTGGCCTTTTCAATGGCATTGGACCTACAAGGACACAGTCAAAGATGATTATCCGAGGTCCGGCATACTCCTTCATTGCTAATATCAGTGTGGAAGCATGCGCAAATTCAATGATGAGGGGGAATTTCTGTAACAGTACAGTATATCCACTCTCATGCACATCTTCCGGTAACTATAATGCTTTGGCGGTTATGGCGAACACGGCAGTAATGGAGAATGTTGTGACCTGCAGGAGTAGTTTTAAAATGTTTTGTGGTCATGAAGGTGTACCAAACTTCTTCTCCTTGGATATAATGAATGTGGCAGAAGAACTTACCTTTACAGTAAAAGATGTCAGATTCAACACTACATCTTTGAATAGCAGTTCTGCTGCAAATGATGTTCATTTAATGTGTTTTGTTCGACACGGTGCAATGCCTTCGGCAACTTTGTATGATTATACCAGTGATTTAAATAAAGTTCCATTGGTTATACATTCTCCACTAATTGGTCGGTGGTACATTAGTATAGTACCTGTCAATCTTACGACGACTCGGGACAGCAATGCTGGAGTTTGCTATTCAATGGTGTCACATCTGCTTCAATGCCCTTTTGGGAAAGGTGGGCCAAATTGTACAATGAATAGCTACATGCTCCAGACATTTGTAAGGAGAGGTCCAACCCCGTTTGAATCGTACTACTTACCGGTCAGTGGCGGAGCATCACATGATTCGGCAAACTTCCCTCTCGAGCCACTTTTAAGCAACTCATCATACAATGGACAACCAGATAACATTTGGACTTTCTTTCTTTTGGACATACCTCGCGGTGGAGCCGGAGGAAATATTCATGTTCAGCTTTCCTCGGATGTCAAGATCAATTATGAAATATATGCTCGATTTGGTGGATTGCCGTCGCTTGTTAGCTGGGATTATTATTATGTGAACAAGACAAGGAGAAGTGATTCATCCATGTTTTTCAAGCTCTATGATTCAAGGGATGACAAGGCTGATTTTTATATTATGTATGCTAGAGAAGGAACTTGGGGATTTGGTCTAAGACATGTTAATACCAGCAATGATTCTTTAAAGGGGCCAACTATCATGTCAATTTCGCTTGAACGGTGCCCAAAGCATTGTTCCTCCCACGGCGAATGTAAATTCTCTTTTGATGCTAGCGGATTGACATCATACAGCTTCTGCTCTTGTGATCGAAACCATGGAGGCTTTGACTGTAGCATTGAAATTGTAACTCATCAAGGACATGTTCGACAATCAATTTTTCTCATTGTCTCGAATGCTGCAGCCATACTTCCTGCCTATTGGGCCCTTAGGAAGAAGGCATTAGCAGAATGGGTTTTATTCACATCCAGTGGAATTTCAAGTGGACTATATCATGCATGTGATGTTGGTACCTGGTGTGCATTAAGCTATAATGTCCTACAGTTCATGGACTTTTGGCTCTCCTTCATGGCTGTGATTAGCACTTTTCTTTATCTTGCTACCATTGATGAAGTATTTAAGAGAGCAATCCACACAGTTATTGCTATCCTTACAGCCCTATTGGCAGCAACAAAAGCAACCAGGTCTTCCAATATTCTTGTTGTTATTGTGATTGGTGCTCTTGGTCTTCTTATTGGATGGTTGATAGAGATCTCAACAAAGTATAGATCCCTTTCAATTCCAGTTCGATTCCCATTGAATTTACATCTCAGTTTTCAAACCATAAAGACATGGATCATTAGTCTTGTCAGGACACTTCTGAGACGGTACAATTTGGCGTATGCTATGGCCGGTTTTGCTGCATTGGCCATGGCAGCAGTAAGCTGGACACTTGAAACTAGTGAAAACTACTGGTTCTGGCATAGCTTTTGGCATATTACAATATATACATCTTCTTTCTTCTTCCTTTGTTCAAAGGCAAATATTGTGGATAGTGAGAATCATCTACCAGCAAATGGAAACTATGAGCTGACTCATCAGAATTCGCTTCCAAGAAGTGGTTAG 2445 0.4094 MAFNLILWYQPNLVLIVFVLFSCSFCVFSSTDEAGGSGETFTVSSFSYPETRLRPFDLRYIRVDLPPWFSVLSIALNSNVDLDISRIETASQSMLPIICFRDGSPPLPDALNISMTNSAISGINGLDVEQCFPMQKNITMTLTNNQISPGVWYIGLFNGIGPTRTQSKMIIRGPAYSFIANISVEACANSMMRGNFCNSTVYPLSCTSSGNYNALAVMANTAVMENVVTCRSSFKMFCGHEGVPNFFSLDIMNVAEELTFTVKDVRFNTTSLNSSSAANDVHLMCFVRHGAMPSATLYDYTSDLNKVPLVIHSPLIGRWYISIVPVNLTTTRDSNAGVCYSMVSHLLQCPFGKGGPNCTMNSYMLQTFVRRGPTPFESYYLPVSGGASHDSANFPLEPLLSNSSYNGQPDNIWTFFLLDIPRGGAGGNIHVQLSSDVKINYEIYARFGGLPSLVSWDYYYVNKTRRSDSSMFFKLYDSRDDKADFYIMYAREGTWGFGLRHVNTSNDSLKGPTIMSISLERCPKHCSSHGECKFSFDASGLTSYSFCSCDRNHGGFDCSIEIVTHQGHVRQSIFLIVSNAAAILPAYWALRKKALAEWVLFTSSGISSGLYHACDVGTWCALSYNVLQFMDFWLSFMAVISTFLYLATIDEVFKRAIHTVIAILTALLAATKATRSSNILVVIVIGALGLLIGWLIEISTKYRSLSIPVRFPLNLHLSFQTIKTWIISLVRTLLRRYNLAYAMAGFAALAMAAVSWTLETSENYWFWHSFWHITIYTSSFFFLCSKANIVDSENHLPANGNYELTHQNSLPRSG 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02874 814 ProSitePatterns EGF-like domain signature 1. 547 558 IPR000742 -
Aip04g02874 814 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 13 813 IPR021910 GO:0016021
Aip04g02874 814 Pfam Protein of unknown function (DUF3522) 568 773 IPR021910 GO:0016021
Aip04g02874 814 PANTHER TRANSMEMBRANE PROTEIN-LIKE PROTEIN 13 813 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02874 Aip-Chr4 120282022 120288410 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02874 - - gmx:100787532 1298.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02874 04 120282022 120288410 Aip02g00096 02 1711687 1718115 PCT