Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00096 ATGTCTTTCAATTCGATTCTGTGGTGTCATCCAAAACTGATTCTTCTCACTGTTTTGTTACTGTTTGGTTCTTCTCTCTGCACTTCTGCAAGTGAAGGTGAACTTGTTGGAACAACGGTTTCTGGTGGCAACTTCTTCACCGTTTCCAGCTTCAGCTACCCTGAGACGACTATCAAGCCCTTTGATTTGCGCTATATCCGAGTTGATATACCGCCATCGTTTTCTGCTGTGTCCATAGCATTGAATTCAGATGTAGATCTTGATCTTTCAAGGGTCGATCGAATTCCAAAAAGCTCACTGCCAATAATATGTTTCAGAGATGGCAGCCCTCCTCTGCCAGATGCCTTAAACACAACTCTGAAAGATTCAGTTGTCTCAGGAATAAATGATCTTGATGTGGAGCAGTGTTTTCCTATGCAGAAGAATATCACTATGAGATTGACAAATGAACAGATATCTGCAGGCGCTTGGTACATTGGTCTATTCAATGGCATTGGAGCGACAAGAACACAATCAAAGATGATTAACCGAGGCTCATCATACTCCTTCATTGCTAATATAAGTGTGGAAGCATGCACGAATTCGATGATGAAGGGGGTGTTCTGTAACAGTACAGTCTATCCACTTTCATGCACATCGTCCAATGTCTTTAAATATTATGATTTGGATGCTACAGAGGTGAAGAAGCCGATGATGGAAAATGCTCTGACCTGCAAAAATAACTTCGAAACTTCGTGTGTTCAGGAAGGCGTACCACAGTTCTATTCCTTGGATATAACAAATATGGCAGAAGAATTGACCATTACAGCAGCAAATGTCAAATTCAACTCTACATCTTCAAATAGCACTTCTAGTGCAGATGATTTTAAGTTAATGTGTTATGCTCGCCATGGTGCAATTCCTTCAGAGACTTCGCATGATTATTCCAGTGATTTGAGTAAATCCCCTCTTGTTATTCGTGCTCCACAGATTGGTCGTCTATACATTAGTATATTACCGGTTAATCTGGCAAAAACGTTAGATGGAACTCAGGATGGCAATGCCAAAGTTTGCTATTCAATGGAAACACAAGTGGTTCAGTGCCCTCTTGGTAAAGCTGGACCGAATTGCACAATGGATAGCTATACACTTCAGACAGTCCTAAGTAGAATTCCAATGCCGTTCGAATCATATTATTTACCAGTTGGTGAGGTAGAAATGGCAGAGTCGGCAAATTTTCCTCTTGAGCCACTTTCAAACAACACAATGAACCAAGGAGAAACTGATAACATTTGGACTTACTTTATTTTGGACATTCCTCGTGGTGCAGCTGGACGAAATATTCATGTACGGCTATCCTCAGATGTGAAGATTAATTATGAATTTTATGCTCGATTTGGTGGATTACCTTCTCTTGAGAGTTGGGACTATTATTATGCTAACAAGACAAGGAAGAGCGACGAATCGGCGTTTTTCATGCTATATAGTTCAAAAGATGACAATGTTGATTTTTACATTATTTATGCTAGAGAAGGAACATGGGGTTTTGGTTTAAGACATCTTAATGCAAGCGGCAATTCTTTGAAAGCACAAACTGCCATGTCTATTTCACTTGAAGGATGCCCGAAACATTGCTCGTCTCATGGTGACTGTAGATATTCTTTTGATGCTAGCGGATTGACATCGTATAGCTTCTGCTCTTGTGATCGGAACCACGGGGGCTTTGACTGTAGCGTTGAAATTGTATCGCATAAAGGGCACATAGTGCAATCGATTTTTCTCATTGCATCGAATGCAGCAGCAATGCTTCCTGCCTATTGGGCCCTTCGGCAGAAGGCATACGCAGAATGGATTTTGTTCACTTCGAGTGGAATTTCGAGTGCGATTTATCATGCATGTGATGTAGGCACTTGGTGTCCCTTGACCTATAATGTTCTTCAGTTCATGGACTTTTGGCTTTCTTTCATGGCCGTGGTTAGCACTTTCGTGTACTTAGCCTCGATCAATGAAACACATAAGAGGGCAATCCACACAGCTGTTGCTATCTTTACTGCACTCATGGCTGCAACCAAGGCAACCAGATCTTCGAATATTGTTCTTGTGTTTGTGCTTGGAGCTATTGGTCTTCTAATCGGTTGGTTGATAGAGGTCTCATCAAAGTATAGGTCCCTTTCATTTTCATTCAGATTCTCACCAAGTTTCCCTCAAAGCTTGTTAACTATAAAGGATTGGCTCTATAAGCTTGTCATGTCGCTTTGGAGGCGGTTCCATTGGGGTTTTGCATTGGCCGGTTTCATCGCGTTAGCCATGGCAGCAACAAGCTGGGTACTTGAAACCAGTTCAACCTACTGGATATGGCATAGCTTTTGGCATGTCACAATATACACATCATCTTTCTTCTTTCTTTGCTCAAAAGCAAGTAATGTGGATGCAGAGGAGGATCAGCTACCTACGACGGAAAACTATGCGCTTACTCGCCAAGACTCGTTTTCGAGAAGCGAGTCTTAA 2487 0.4174 MSFNSILWCHPKLILLTVLLLFGSSLCTSASEGELVGTTVSGGNFFTVSSFSYPETTIKPFDLRYIRVDIPPSFSAVSIALNSDVDLDLSRVDRIPKSSLPIICFRDGSPPLPDALNTTLKDSVVSGINDLDVEQCFPMQKNITMRLTNEQISAGAWYIGLFNGIGATRTQSKMINRGSSYSFIANISVEACTNSMMKGVFCNSTVYPLSCTSSNVFKYYDLDATEVKKPMMENALTCKNNFETSCVQEGVPQFYSLDITNMAEELTITAANVKFNSTSSNSTSSADDFKLMCYARHGAIPSETSHDYSSDLSKSPLVIRAPQIGRLYISILPVNLAKTLDGTQDGNAKVCYSMETQVVQCPLGKAGPNCTMDSYTLQTVLSRIPMPFESYYLPVGEVEMAESANFPLEPLSNNTMNQGETDNIWTYFILDIPRGAAGRNIHVRLSSDVKINYEFYARFGGLPSLESWDYYYANKTRKSDESAFFMLYSSKDDNVDFYIIYAREGTWGFGLRHLNASGNSLKAQTAMSISLEGCPKHCSSHGDCRYSFDASGLTSYSFCSCDRNHGGFDCSVEIVSHKGHIVQSIFLIASNAAAMLPAYWALRQKAYAEWILFTSSGISSAIYHACDVGTWCPLTYNVLQFMDFWLSFMAVVSTFVYLASINETHKRAIHTAVAIFTALMAATKATRSSNIVLVFVLGAIGLLIGWLIEVSSKYRSLSFSFRFSPSFPQSLLTIKDWLYKLVMSLWRRFHWGFALAGFIALAMAATSWVLETSSTYWIWHSFWHVTIYTSSFFFLCSKASNVDAEEDQLPTTENYALTRQDSFSRSES 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00096 828 Pfam Protein of unknown function (DUF3522) 580 785 IPR021910 GO:0016021
Aip02g00096 828 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 15 827 IPR021910 GO:0016021
Aip02g00096 828 PANTHER TRANSMEMBRANE PROTEIN-LIKE PROTEIN 15 827 - -
Aip02g00096 828 Gene3D - 476 574 - -
Aip02g00096 828 ProSitePatterns EGF-like domain signature 1. 559 570 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00096 Aip-Chr2 1711687 1718115 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00096 - - gmx:100777848 1254.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02874 04 120282022 120288410 Aip02g00096 02 1711687 1718115 PCT