Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02813 ATGGTTTCATTTTCAGTTGAAGGAACTGTGTGGTGCTGTGTGTTAATGGTTATTATAACTGTGAGTTTTGCTGGGGACATAGTACACCCTGATAATATTGCTCCCAAGAGACCTGGTTGTGATAACAACTTTGTTCTGGTTAAAGTCCCAACTTGGATTAATGGTGTGGAGAACTGTGAGTATGTTGGTGTTGGTGCAAGATTTGGCCCTACATTGGAATCTAAAGAAAAACATGCCACCCATACTAGAGTCGCCATTGCGGACCCTCCTGATTGTTGTAGCAAGCCGAAGAATAAGCTCACTGGCGAGATCATTTTGGTGCACCGAGGACAATGTAGTTTCACAACCAAGGCAAATATAGCTGAAGAAGCTGGTGCTTCAGCGATCCTCATTATAAATAATCGGACAGAACTTTTCAAGATGGTTTGTGAAGAGAATGAAACTGATATTGATATTGGAATTCCTGCTGTGATGCTTCCACAAGATGCTGGTGAAAACATTAAAAGTCATATACAAAACAAATCGATAGTGTCTGTGCAGTTATACTCTCCGCTGCGCCCATTAGTTGATGTAGCGGAAGTGTTTTTATGGCTTATGGCTGTTGGTACCATTCTCTGTGCTTCTTATTGGTCTGCCTGGACAACCAGAGAGGCTGCTGTTGAGCGGGAGAAGCTATTAAAGGATGCTTCGGATGAATATTTGAATACTGAGAATGCTGGTTCTACTGGTTATGTAGAAATCAGTACCATGGCAGCAATTTCTTTTGTTGTGATCGCTTCTTGTTTCTTGCTTATGCTTTACAAATTAATGGCATCCTGGTTTATTGAAGTTCTGGTGGTTCTATTTTGCATTGGTGGTGTTGAGGGACTGCAAACTTGCTTGGTGGCTCTGTTATCATGTTTCAGATGGTTTCAACGTGCTGGGCAAACATTTGTAAAAATACCCTTCTTTGGAGCTGTCTCATATTTGACGCTTGCTATGACTCCCTTCTGCATAGTATTTGCCGTGCTTTGGGGAGTTTTTCGACACGTATCTTTTGCATGGATTGGACAAGATATTCTTGGAATTGCATTGATAATTACGGTTCTTCAGATTGTCCGCATACCAAATCTCAAGGTTGGAACTGTTCTTCTTAGTTGCGCCTTCCTATATGACATCTTCTGGGTGTTTGTCTCTAAGTGGTGGTTCCATGAGAGCGTAATGATAGTGGTAGCTCGAGGCGATAGGAGTGGAGAAGATGGTATCCCCATGCTGCTTAAAATACCGCGTCTGTTTGATCCTTGGGGTGGTTACAGCATAATTGGTTTTGGGGACATAATCTTACCAGGGCTTCTAGTCGCATTTTCACTAAGGTATGATTGGTTGGCAAAGAGGAACCTTCGGTCTGGATACTTCGTGTGGGCAATGAGTGCTTACGGTTTAGGTCTCCTTATTACATATGTTGCTTTGAACTTGATGGATGGGCATGGTCAACCAGCATTGCTTTATATCGTCCCGTTTACTCTTGGCACATTTTTGTCATTGGGAAAGAAGAGAGGTGAACTCAATCTTTTATGGACAAGAGGGGAACCAGAAATGCCTTGCCCTCATAACCAAGAGTCTCAACAATGA 1611 0.4246 MVSFSVEGTVWCCVLMVIITVSFAGDIVHPDNIAPKRPGCDNNFVLVKVPTWINGVENCEYVGVGARFGPTLESKEKHATHTRVAIADPPDCCSKPKNKLTGEIILVHRGQCSFTTKANIAEEAGASAILIINNRTELFKMVCEENETDIDIGIPAVMLPQDAGENIKSHIQNKSIVSVQLYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWTTREAAVEREKLLKDASDEYLNTENAGSTGYVEISTMAAISFVVIASCFLLMLYKLMASWFIEVLVVLFCIGGVEGLQTCLVALLSCFRWFQRAGQTFVKIPFFGAVSYLTLAMTPFCIVFAVLWGVFRHVSFAWIGQDILGIALIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKWWFHESVMIVVARGDRSGEDGIPMLLKIPRLFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKRNLRSGYFVWAMSAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELNLLWTRGEPEMPCPHNQESQQ 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02813 536 PANTHER SIGNAL PEPTIDE PEPTIDASE 12 536 IPR007369 GO:0004190|GO:0016021
Aip04g02813 536 Pfam PA domain 90 167 IPR003137 -
Aip04g02813 536 SMART psh_8 243 512 IPR006639 GO:0004190|GO:0016021
Aip04g02813 536 Pfam Signal peptide peptidase 244 523 IPR007369 GO:0004190|GO:0016021
Aip04g02813 536 SUPERFAMILY PA domain 99 139 IPR046450 -
Aip04g02813 536 Gene3D - 41 184 - -
Aip04g02813 536 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 12 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02813 Aip-Chr4 119277382 119283101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02813 41 181 Miscellaneous Gene Families AT2G30290 30.667 2.33e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02813 K09597 - gmx:100808921 989.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02813 04 119277382 119283101 Aip04g02813 04 119277382 119283101 ECH
Aip04g02813 04 119277382 119283101 Aip02g00077 02 1445570 1451429 PCT