Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00077 ATGGTTCTTCCACATGGTGTGTTCCTTCTCTTCTTCATGCTCTCTTCTGCAACTTTGGCTTTGGCTGGAGACATAGTTCACCATGATGATGTTGCTCCAAGAAGACCTGGTTGTGAGAACAACTTTGTTCTGGTCAAAGTCCCCACTTGGATTGATGGTGTTGAAAACAGTGAGTATGTAGGTGTTGGTGCAAGATTCGGCCCTACGTTGGAGTCAAAAGAGAAACGTGCCAACCACACTAGAGTTGTCATGGCTGACCCTCCTGATTGTTGTTCCAAGCCTAAGAATAAGCTCACTAGCGAGATCATTGTGGTGCAACGAGGAAAATGTAGTTTCACAACCAAGGCAAATATAGCTGAGGAAGCTGGTGCTTCAGCCATCCTCATTATAAATTATAGGACAGAACTTTTCAAGATGGTTTGTGAAGAGAATGAAACCGATGTTGATATTGGTATACCCGCTGTCATGCTTCCACAATATGCTGGATTAAACATAGAAAAACATATAAAAAACAACTCCACAGTACTTTATATTTCGATCCCTGAATTGTTCTTATTGTCTTACTTGATATGCTTNNNNNNATACTCTCCGCTGCGTCCATTGGTTGATGTTGCGGAAGTATTTCTATGGCTTATGGCCGTTGGAACCATTTTATGTGCTTCTTATTGGTCTGCTTGGACTGCTAGAGAAGCAGCTATTGAGCAAGAGAAGCTTTTAAAGGATGCTTCGGATGAATACCTTAGCACACAGAATGTTGGTTCAAGTGGTTATGTGGAAATCAGTACCGTGGCTGCAATTTTATTTGTTGTGATTGCTTCTTGTTTCTTGGTTATGCTTTACAAGTTAATGTCATTCTGGTTTGTTGAAGTTCTGGTGGTTCTATTCTGCATTGGGGGAGTAGAGGGACTGCAAACTTGTTTGGTGGCTCTTTTATCATGTTTCAGATGGTTTCAACATGCTGCACAAACATTTGTGAAAATTCCCTTCTTTGGAGCCGTCTCATATCTGACATTTGCCGTTACCCCCTTTTGCATAGTGTTCGCTGTGATATGGGCAGTTTATCGTCGTGCTTCGTTTGCTTGGATCGGTCAAGACATTCTTGGTATCACACTGATAATTACAGTTCTTCAGATTGTACGGATACCGAATCTCAAGGTTGGAACTGTTCTTCTCAGCTGCGCCTTCCTATACGACATCTTTTGGGTGTTCGTTTCTAAACGGTGGTTCCATGAGAGCGTCATGATAGTGGTAGCTCGAGGTGATAAGAGTGGAGAAGATGGTATCCCAATGCTGCTAAAGATACCACGTTTGTTCGATCCTTGGGGTGGTTACAGCATCATCGGTTTTGGGGACATTATCTTACCAGGGCTTCTAGTAGCATTTTCACTAAGGTATGATTGGTTGGCAAAGAAGAGCCTTCGTGCTGGGTACTTCTTGTGGGCAATGACTGCCTATGGCTTGGGTCTCCTCATCACATACGTGGCTTTGAACTTGATGGATGGACATGTCCAACCAGCTTTGCTTTATATAGTCCCCTTCACACTTGGAACCTTTTTGTCATTGGGAAAGAAGAGAGGTGAACTCAAGATTTTATGGACAAGGGGAGAACCAGAGAGACCTTGCCCTCACATGCAAGAAGAGGATCAACAATCACTTAACCAGCATTGA 1668 0.4287 MVLPHGVFLLFFMLSSATLALAGDIVHHDDVAPRRPGCENNFVLVKVPTWIDGVENSEYVGVGARFGPTLESKEKRANHTRVVMADPPDCCSKPKNKLTSEIIVVQRGKCSFTTKANIAEEAGASAILIINYRTELFKMVCEENETDVDIGIPAVMLPQYAGLNIEKHIKNNSTVLYISIPELFLLSYLICXXXYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWTAREAAIEQEKLLKDASDEYLSTQNVGSSGYVEISTVAAILFVVIASCFLVMLYKLMSFWFVEVLVVLFCIGGVEGLQTCLVALLSCFRWFQHAAQTFVKIPFFGAVSYLTFAVTPFCIVFAVIWAVYRRASFAWIGQDILGITLIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKRWFHESVMIVVARGDKSGEDGIPMLLKIPRLFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKKSLRAGYFLWAMTAYGLGLLITYVALNLMDGHVQPALLYIVPFTLGTFLSLGKKRGELKILWTRGEPERPCPHMQEEDQQSLNQH 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00077 555 SMART psh_8 256 525 IPR006639 GO:0004190|GO:0016021
Aip02g00077 555 SUPERFAMILY PA domain 98 135 IPR046450 -
Aip02g00077 555 Gene3D - 38 181 - -
Aip02g00077 555 PANTHER SIGNAL PEPTIDE PEPTIDASE 10 554 IPR007369 GO:0004190|GO:0016021
Aip02g00077 555 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 10 554 - -
Aip02g00077 555 Pfam Signal peptide peptidase 257 536 IPR007369 GO:0004190|GO:0016021
Aip02g00077 555 Pfam PA domain 88 164 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00077 Aip-Chr2 1445570 1451429 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00077 K09597 - gmx:100795197 976.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00077 02 1445570 1451429 Aip02g00077 02 1445570 1451429 ECH
Aip04g02813 04 119277382 119283101 Aip02g00077 02 1445570 1451429 PCT