Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02796 ATGCAGGTGTTCGTTAATTTGATCATAAATTCTTGTGCTAAGAATATGGAGAAGAAATCATCATCATCAACAAAGTTTGATGAGATTTCTGAGTTAGGATTTCAACCTCCTCCTCCTTCTCCTTCTATGGAGGATCATTCGGCAACCGATGCATGGACATATTCAGAGCCAGAGGCATCAAACTTATCAGATTCAGTTGATGAAAGCAGTTATGCCAGTGACTTTTCGCCTTCTCGGCCGACGGCTGCGAGAGCAGATGCTAAACAAGTTGTTCTTTCAAGGCTAGGATTGAAGTTGCGCAAGAATTCGGTCGATGTTAAGCTCAATGAGAGTGATCTTATGGATTCAGGTGAGCTTGAAGTAATGAAGGAAAGATTTTCAAAGCTGCTGTTGGGAGAAGACATGTCTGGTGGTGGAAAAGGAGTTTGCACTGCAGTTACAATTTCAAATGCCATTACCAATCTCTATGCAACTGTATTTGGACAAAGTTTGAAGTTGGAGCCACTGAAGCCTGAGAAGAAAGCAATGTGGAAAAGAGAAATGAAGGTTCTTTTATCAGTGTGTGATTATATAGTAGAATTTGCCCCAACTGCACAATATTTAGAAGATGGAACAATCGTTGAGATGATGAAGAGTAGACCAAGATCAGACATATATATCAACCTCCCTGCTCTACAGAAGCTTGACACAATGCTCATAGAAATATTAGACACTTTCCATGATACTGAATTTTGGTATGTAGATAACATTCCGGCGAATTCACCACGCACGCGCGCAACCTCTTTTCGGAGGATTGTTCAGCGAAAAGACGAGAAATGGTGGCTTCCGGTGCCTTGTGTTCTCCCCGGTGGCCTATCTGAAAAATCAAGGAAGCACTTAGTAGAAAAAAGGGATTGTGCTAACCAAATTCATAAAGCAGCCATGGCAATAAACAACAATGTTCTTGCTGAGATTGATATCCCAGAAACCTACATTGATAATCTTCCTAAGCTGAAATTCTATAGCCAAGTGGTTGAGGATCCAATTACATGTGACCCCCTAAAGTCTTGGAATTTATCATCAAATTTCATAAGCCTTTTATGGAAGCCAATGATAGCAGCTGAGACTTGTAGAAAAAGGGATGATATAATTTCACATAAGAATGGAAGAGCAAATATGGGAGACACAATTTACCACTACATGTCTGCTGCAGAGAAATTCTCAGCTGATCAACTTCTTGACTACTTGAAGATAAGTTCTGAGCATGAAGCACTTGAGCTGGCCGACAGGGTCGAGTCTTCGATGTACTCGTGGCGCCGGAAAGCTTGCCTGAGCCATTCCAAATCATCCTGGAGCAAAGTGAAGGAACTCATGGCCGACGCCGACCGGAAGGACAAGAATTACACCTTAGCTGAGAGAGCAGAGACTTTGTTGTTCTGCCTGAAGCAAAGATATCCTGAACTGTCACAAACTTCTCTTGACACATGCAAGATTCAGTATAACAAGGATGTTGGAAAAGCAATATTAGAGAGTTATTCAAGAGTACTAGAAGGCCTAGCATTCAACATTGTTGCTTGGGTTGAAGATGTTCTCTATGTAGATAAATCAATGAAGAACAGAGAAGTCTAG 1608 0.4136 MQVFVNLIINSCAKNMEKKSSSSTKFDEISELGFQPPPPSPSMEDHSATDAWTYSEPEASNLSDSVDESSYASDFSPSRPTAARADAKQVVLSRLGLKLRKNSVDVKLNESDLMDSGELEVMKERFSKLLLGEDMSGGGKGVCTAVTISNAITNLYATVFGQSLKLEPLKPEKKAMWKREMKVLLSVCDYIVEFAPTAQYLEDGTIVEMMKSRPRSDIYINLPALQKLDTMLIEILDTFHDTEFWYVDNIPANSPRTRATSFRRIVQRKDEKWWLPVPCVLPGGLSEKSRKHLVEKRDCANQIHKAAMAINNNVLAEIDIPETYIDNLPKLKFYSQVVEDPITCDPLKSWNLSSNFISLLWKPMIAAETCRKRDDIISHKNGRANMGDTIYHYMSAAEKFSADQLLDYLKISSEHEALELADRVESSMYSWRRKACLSHSKSSWSKVKELMADADRKDKNYTLAERAETLLFCLKQRYPELSQTSLDTCKIQYNKDVGKAILESYSRVLEGLAFNIVAWVEDVLYVDKSMKNREV 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02796 535 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 379 531 IPR005512 GO:0005085
Aip04g02796 535 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 118 331 IPR005512 GO:0005085
Aip04g02796 535 MobiDBLite consensus disorder prediction 46 77 - -
Aip04g02796 535 MobiDBLite consensus disorder prediction 20 79 - -
Aip04g02796 535 Gene3D PRONE domain, subdomain 2 375 493 - -
Aip04g02796 535 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 22 535 - -
Aip04g02796 535 Gene3D PRONE domain, subdomain 1 111 345 - -
Aip04g02796 535 ProSiteProfiles PRONE domain profile. 109 535 IPR005512 GO:0005085
Aip04g02796 535 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 22 535 IPR038937 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02796 Aip-Chr4 118940894 118947714 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02796 - - adu:107485793 1052.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02796 04 118940894 118947714 Aip04g02796 04 118940894 118947714 ECH
Aip04g02796 04 118940894 118947714 Aip02g00070 02 1358674 1364147 PCT