Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00070 ATGGAAAATTCATCAAATTTTGATGAAAGTTCTGATTTGGGGTATCAGCAATCAACTTCTTCTATGGATCAAAATGATCAAAGTACTGAATACTCTCCATTCAGTGGTGATTCATTTGCATATTGTAGGAGTAACTCAGAGGCCTCAAACTTGTCATCATTAGAGCCTGTTGATGACAATCATAGTTTTGCTAGTAGTGATCTTCAACCTTCGCCGCCTTCTCGGTGGATTGCCGCCGCCACCATGAGAACCGAGTCTAGTCATCATCATGGAGCTGCTCTTTCAAGTCTTGGAGGAATGAAGAAGAGGATGCATTCACTAGATAGTAAATCTGATGATCTTGATCTGCTGGAGTCAGAGCTTGAAATGATGAAGGAAAGATTTGCAAAGCTTCTATTGGGGGAAGACATGTCTGGTGGTGGAAAAGGTGTATGCACTGCAGTTACAATCTCAAACTCCATTACTAACCTTTATGCAACTGTTTTTGGACAAAACCTGAAGTTGGAGCCTCTGAAGGCTGAGAAGAAGGCCATGTGGAAAAGAGAAATGAATTGTCTTCTATCTCTCTGTGATTACATTGTTGAATTTGCTCCAACTGCACAATGCTTAGATGATGGCACAATTGTAGAGATGATGACAAGCAGACCAAGATCAGATATTTATATCAACCTTCCAGCTTTACAGAAACTTGACACATTGCTTATGGAAATATTGGATAGTTTCAAGGATACTGAATTTTGGTATGCGGAACAAGGGAGTATGTCGGGGAATTCGTCTCGGTCACGTGCCGGATCGTTTCGAAGGGTGGTTGTTCAAAGGAAAGACGAGAAATGGTGGTTGCCAGTTCCCTGTGTTCACCCTGGTGGCCTCTCTGATAAGTCAAGGAAGCACTTGATTGAGAAAAGAGATTGTGCAAATCAAATTCATAAAGCAGCCATGGCAATAAATAGCAGTGTTCTAGCAGAGATGGTTATCCCTGAGACATACATGGCAAATCTTCCCAAGAGTGGAAGAGCATGCCTAGGGGACACAGTTTACCGCTATATGTCTTCTGCAGACAAATTCTCACCTGATCACCTTCTTGATTGCCTTAAAATAAGCTCTGAACATGAAGCACTTGAGCTGGCAGACAGGGTTGAATCTTCGATGTACACATGGCGGCGAAAGGCTTGTTTAAGCAACTCAAAATCATCATGGAACAAAGTGAAGGATCTCATGGCCGAAACCGACCGCAAAGACAAGAACTTTTTGTTAGCTGAGAAAGCTGAGACTTTGTTGTTCTGCTTGAAGCAAAGATATCCTGAACTTTCACAGACTTCCTTGGACACATGCAAAATTCAATACAATCAGGATGTAGGAAAAGCAATACTAGAAAGCTACTCAAGAGTTTTAGAAGGCTTAGCATTCAACATTGTTGCTTGGATTGAAGATGTTCATTGTGCAGATAAGTCAATGAGAAACCAACATGGTTTCACTTTCCCTTTCTCTTTCTTTTTTCTGATTCTTAATCTCTTTCATCTCTTTTCTGCTAAATCAAATCAAATATCTCGCATCGCTCCTTCGATACACCGCCTCCCTCTTCACCTTTCGCCCCTGCGATCATTGAAGAGAGCACTCTGTCTAGCTGAATCTCTCAAAGAATCCGAAGTGAAGTACCAAGTGAGGATCATTGATGAAGCTTCCTTTCATCTTGATCGCAATGAGAGCTATGCAAATATGCCGTCTGAGAAGAATCTGAGAGGAGTGCTTCGCTCTGAAGTGGATAGATCCGTGGCCAAAGATAATATCATTATAGTGGACTCTTTGAATAGCATCAAGGGTTATCGATACGAGTTATGGTGTTTGGCTCGTGCAGCGGGGATTAGATACTGTGTTGTTTACTGTGACGTGGAGGAAAACAATTGTAGGAAGTGGAACGAGGAGCGCAGGGAGAAAGGCGAAGCTAGTTACAATGATACTATCTTTGATGATTTGGTGAGGAGGTTTGAGAGACCTGATAGCAGAAACCGGTGGGATGCGCCGTTGTTTGAGCTATGGCCTCACAGAGATGGAATAGACAAGTCTTCTGCTGCCATTCTGGATGCTGTTTCATACTTGACCAAGAAGGTGGATTCCAAAACCAGGGATGTCAAGATATTGCAGCCTACTATTGCGACTCAGACAAGTCGTTTTTCGGATGCGAATTCTCTGTATGAGTTGGACAAGGCAACACAGGAGGTGACAAACACTATAGCAGAGGCGCAATCACAAGCTCTTGGTGGACCTCTTGTTGGTATTTCTGTGGGGAAAGACTTGCCTACTATCAATATTTCAAGGCCAGTTGGGCTGCCGGAGCTTCGCAGGATGCGGCGAACCTTCATCAAACTTACGGGCCAAACAAGTTTAAGCGGGCCACCACCTCCTTCGGATGCAGACAGTGCAAAGAGAATGTTTATTGACTACTTGAATAGGGAATTAGGAACTTCTTGA 2469 0.4305 MENSSNFDESSDLGYQQSTSSMDQNDQSTEYSPFSGDSFAYCRSNSEASNLSSLEPVDDNHSFASSDLQPSPPSRWIAAATMRTESSHHHGAALSSLGGMKKRMHSLDSKSDDLDLLESELEMMKERFAKLLLGEDMSGGGKGVCTAVTISNSITNLYATVFGQNLKLEPLKAEKKAMWKREMNCLLSLCDYIVEFAPTAQCLDDGTIVEMMTSRPRSDIYINLPALQKLDTLLMEILDSFKDTEFWYAEQGSMSGNSSRSRAGSFRRVVVQRKDEKWWLPVPCVHPGGLSDKSRKHLIEKRDCANQIHKAAMAINSSVLAEMVIPETYMANLPKSGRACLGDTVYRYMSSADKFSPDHLLDCLKISSEHEALELADRVESSMYTWRRKACLSNSKSSWNKVKDLMAETDRKDKNFLLAEKAETLLFCLKQRYPELSQTSLDTCKIQYNQDVGKAILESYSRVLEGLAFNIVAWIEDVHCADKSMRNQHGFTFPFSFFFLILNLFHLFSAKSNQISRIAPSIHRLPLHLSPLRSLKRALCLAESLKESEVKYQVRIIDEASFHLDRNESYANMPSEKNLRGVLRSEVDRSVAKDNIIIVDSLNSIKGYRYELWCLARAAGIRYCVVYCDVEENNCRKWNEERREKGEASYNDTIFDDLVRRFERPDSRNRWDAPLFELWPHRDGIDKSSAAILDAVSYLTKKVDSKTRDVKILQPTIATQTSRFSDANSLYELDKATQEVTNTIAEAQSQALGGPLVGISVGKDLPTINISRPVGLPELRRMRRTFIKLTGQTSLSGPPPPSDADSAKRMFIDYLNRELGTS 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00070 822 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 556 674 IPR027417 -
Aip02g00070 822 MobiDBLite consensus disorder prediction 50 72 - -
Aip02g00070 822 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 1 334 - -
Aip02g00070 822 Gene3D - 537 707 IPR027417 -
Aip02g00070 822 Coils Coil 107 127 - -
Aip02g00070 822 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 119 486 IPR005512 GO:0005085
Aip02g00070 822 PANTHER PRONE DOMAIN-CONTAINING PROTEIN-RELATED 334 488 - -
Aip02g00070 822 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 334 488 IPR038937 GO:0005085
Aip02g00070 822 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 334 IPR038937 GO:0005085
Aip02g00070 822 MobiDBLite consensus disorder prediction 50 74 - -
Aip02g00070 822 ProSiteProfiles PRONE domain profile. 111 492 IPR005512 GO:0005085
Aip02g00070 822 Gene3D PRONE domain, subdomain 1 356 491 - -
Aip02g00070 822 Gene3D PRONE domain, subdomain 1 114 355 - -
Aip02g00070 822 Pfam Chromatin associated protein KTI12 538 816 IPR013641 -
Aip02g00070 822 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00070 Aip-Chr2 1358674 1364147 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00070 - - gmx:100785956 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00070 02 1358674 1364147 Aip02g00070 02 1358674 1364147 ECH
Aip04g02796 04 118940894 118947714 Aip02g00070 02 1358674 1364147 PCT