Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02619 ATGGCGTCCACCAACAGCGGGAACAAGGGATCACGTTTCCCACTTCTCGCGTTCCTTCTCATCTGCCTCCTCGCTCCTCTCCTCTTCTTCTTCTTCTCGAGAGGCCTTCACAATGCTCCCGATCAAGATGTTATGTCAACCGTTCCTAGTAAACAGGTTGCCAAATGGACAGAATGGCAGACACTGCAGGACCTTAAATTGTATTTTTCAAAAGAGGCTCTTGATGTTATTGTATCGAGCACAGATGATTTGGGTCCTTTGAGTCTTGAGAATTTCAAAAAAAGTAATTTGTTACCTTCATGGAGAATCACTGGGTTAAAGACTTCAAATGCTACCTATGAGCTAAACCAACCAACAACACATGGTGTACAGGAAAAACAAGAGGCGAAGGAAGGCAGATCTTCAGTTGGTCTTGATCAATGGACTCTTAGTCCTGTGCACTTATCCAGAAGGCACTTAATAGAGAAAAGGAAGGAAAAACGTGCTGCTAAGTTGGTGAAACTGGAGGATGAAGTAATTGTAAAACTTGAAGATTCAGCTATTGAACGCTCAAAGACAGTAGATTCAGCAGTTTTAGGTAAATACAACATGTGGAGGAAAGAAAATGACAATGAAAATGCCGATTCTACTATTCGGTTGATCCGAGACCAAATTGTTATGGCTAGAGTGTATTTGAGCCTTGCAAAGATGAAGAACAAGGTTGACCTGTACCAAGAGCTGCAAAATCGGATTGGAGAGAGTCAGCATGATTTAGGTGAGGCAACTACTGATGCTGATCTACCTAAAAGTGCACATGAAAAAATCAAAGCTATGGGTCAAGTCCTGTCTAAAGCAAAAGATCAATTGTATGACTGCAAGTTGGTCACTGGGAAATTGAGGGCAATGCTACAAACAGCTGATGAGCAAGTTAGGGGCCTGAAAAAGCAAAGTACATTCCTCAGTCAGTTGGCTGCCAAGACCATACCTGATGGAATCCACTGCTTATCGATGCGCCTTACCATTGATTATTACCTCCTTTCTCCTGAAAAGAGAAAGTTTCCTAAGAGTGAGAATTTGGAGAATCCTAATCTTTATCATTATGCCCTTTTCTCGGACAATGTCTTGGCTGCATCAGTGGTTGTCAACTCAGCTATTATGAATGCAAAGGATCCTTCAAAGCATGTTTTTCATCTCGTTACTGATAAGCTAAATTTCGGAGCCATGAACATGTGGTTTTTGTTGAACCCTCCTGGAAAAGCTACTATCCATGTTGAAAATGTTGATGAATTTAAGTGGTTGAATTCATCTTACTGCCCTGTCTTGAGGCAGCTCGAATCTGCAACAATGAAAGAGTATTATTTCAAGGCAGGCCATCCAACATCCGGTGGTTCCTCTAATCTGAAGTACAGAAACCCGAAATATCTCTCAATGCTCAACCATCTTAGGTTCTATCTTCCGCAAGTTTATCCAAAATTGGATAAGATTCTTTTTCTTGATGATGACATTATTGTCCAGAAGGATTTGACAGGATTATGGGCCGTGAATCTTCATGGAAAAGTAAATGGTGCCGTTGAAACATGTGGGGAGAGTTTTCACCGTTTCGACAAGTATCTTAACTTTTCAAATCCTCATATTGCGAAAAATTTTGATCCCAATGCCTGTGGTTGGGCTTATGGAATGAACATGTTTGATTTAAAGGAGTGGAAAAAGAAGGATATTACCGGCATATATCACAAGTGGCAGAATATGAATGAAGATAGGGTGTTATGGAAGCTGGGGACATTACCTCCAGGTCTAATGACATTCTATGGATTGACGCATCCACTAAACAAATCATGGCACGTACTTGGTTTAGGTTACAATCCAAGTGTAGATAAATCTGAGATCGACAATGCTGCAGTTATTCACTACAATGGTAATATGAAGCCATGGCTAGAGATAGCCATGACAAAATACCGGTCGTATTGGACCAAATATGTCAAGTATGATCATCCCTATCTTAGAAACTGTAAGCTAACTGAATGA 2004 0.4077 MASTNSGNKGSRFPLLAFLLICLLAPLLFFFFSRGLHNAPDQDVMSTVPSKQVAKWTEWQTLQDLKLYFSKEALDVIVSSTDDLGPLSLENFKKSNLLPSWRITGLKTSNATYELNQPTTHGVQEKQEAKEGRSSVGLDQWTLSPVHLSRRHLIEKRKEKRAAKLVKLEDEVIVKLEDSAIERSKTVDSAVLGKYNMWRKENDNENADSTIRLIRDQIVMARVYLSLAKMKNKVDLYQELQNRIGESQHDLGEATTDADLPKSAHEKIKAMGQVLSKAKDQLYDCKLVTGKLRAMLQTADEQVRGLKKQSTFLSQLAAKTIPDGIHCLSMRLTIDYYLLSPEKRKFPKSENLENPNLYHYALFSDNVLAASVVVNSAIMNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPGKATIHVENVDEFKWLNSSYCPVLRQLESATMKEYYFKAGHPTSGGSSNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIIVQKDLTGLWAVNLHGKVNGAVETCGESFHRFDKYLNFSNPHIAKNFDPNACGWAYGMNMFDLKEWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYNPSVDKSEIDNAAVIHYNGNMKPWLEIAMTKYRSYWTKYVKYDHPYLRNCKLTE 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02619 667 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 361 661 IPR029044 -
Aip04g02619 667 Pfam Glycosyl transferase family 8 327 641 IPR002495 GO:0016757
Aip04g02619 667 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 7 667 IPR029993 GO:0047262
Aip04g02619 667 CDD GT8_like_1 358 654 - -
Aip04g02619 667 SUPERFAMILY Nucleotide-diphospho-sugar transferases 358 664 IPR029044 -
Aip04g02619 667 PANTHER HEXOSYLTRANSFERASE 7 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02619 Aip-Chr4 114638995 114644045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02619 10 667 Glycosyltransferase AT3G61130 75.152 0.0 1026
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02619 K13648 - gmx:100798073 1116.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02619 04 114638995 114644045 Aip04g02619 04 114638995 114644045 ECH
Aip04g02619 04 114638995 114644045 Aip02g02744 02 103334502 103339081 PCT