Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02744 ATGGCGCCAAAGAGAGGGATTTCGTTCTCAAGGAGCAGAAGCAGCAGCGGCAAGTTGTCGTCATCATCTTCGTCATCGTCATCGCATTTTCCTGTTTTGGCGTTCGTGATTCTCTGTGTTATGGCTCCGATGATTTTCTTCCTCGGAAGAGGCCTCTACGCTGCGGATCAAGATGATTTTTCAGCAGTTCCAAGTAATCAGGTTGTCACATGGAGAGGATGGCAAGCATTGCAGAATCTTAAATCATTTTTTCCAAAAGAGGTTCTTGATGTTATCGTATCCAGCACGAATGATACAGGGCCTTTGAGTCTTGATAATTTCAGAAAAAATAATATGTCTGCCTCTTGGAGAGTCGTGGAGTTGGAGACTTCAAATGCCACAAATGAGCCCAAAACAGATGACAGACAAGAGAAACCAAAGCTGAAGGATGGAAAATCTTCAGCTGATGGTCGTACTCGATGGATTGATAGTCCTACGCAACAAGCCAGAAGGCAATTAATAGGGAAAAGGCGGGAGAGGCGTGCTGCTGAGTTGGTAAAATTGAACGATGAATTAATCGCAAAACTTGAAAATTCAGCTATTGAACGCTCAAAATCTGTTGAGTCAGCTGTTCTAGGTAAATACAGCATTTGGAGGAAAGAAGTTGAGTATGAAAATGCTGATTCTACTGTTCGGTTGATGCGGGACCAAAACATTATGGCTAGGGTATATTTAAGTATTGCAAAGATGAAGAACAAGCTTGAACTTTTCCAAGAACTGCAAACTCGGCTAAAAGAGAGTAAACGTGCTTTAGGCGATGCTACTTCTGATGCTGATCTAAATCGCAGTGCACATGAAAAGATAAAGGCTATGGGTCAAGTCCTGTCAAAAGCAAGAGAACAATTGTATGACTGCAAATTGGTATCTGGGAAACTAAGGGCAATGCTACAAACAGCCGATGAGCATGTTCGGAGCTTTAAGAAACAGAGTACATTTCTCAGTCAGTTGGCTGCAAAGACGATACCTAACGGAATCCATTGCTTATCTATGCGTCTTACCATAGATTACTACCTTCTTCCACCGGAAAAGAGAAAGTTCCCTGGGAGTGAGAACTTGGAGGATCCCAGTCTTTATCATTATGCACTGTTTTCAGACAATGTCTTGGCTGCATCTGTTGTTGTCAACTCAACTATTACGAATGCTAAGGATCCTTCAAAGCATGTTTTTCATCTTGTTACTGACAAACTAAATTTTGGAGCCATGAACATGTGGTTTCTGTTGAACCCACCTGGAAAAGCTACAATTCATGTTGAAAATGTCGATGAATTTAAGTGGTTGAACTCATCCTACTGCCCAGTCCTGCGGCAGCTAGAATCTGCAACAATGAGAGAGTATTATTTTAAGGCAGGCCATCCGAACACACTTTCTTCTGGTGCTTCAAATCTGAAGTACAGAAACCCCAAATATCTGTCAATGCTCAACCATCTGAGATTCTACCTTCCACAAGTTTATCCAAAGTTGGATAAGATCCTTTTTCTCGATGATGACATCGTTGTCCAGAAGGATTTGACTGGTTTGTGGGCTGTGAATCTCCAAGGTAAAGTAAACGGTGCAGTCGAAACATGTGGTGCGAGCTTTCACCGATTTGACAAGTATCTGAACTTTTCAAATCCACATATTGCAAGAAATTTTGATCCGAATGCTTGTGGCTGGGCATATGGAATGAACATATTTGATCTGAAGGAGTGGAAAAAGAAGGATATCACTGGCATATATCACAAGTGGCAGAATATGAATGAAGACAGGGTGCTGTGGAAGCTGGGTACATTACCCCCGGGGCTAATGACATTCTATGGTCTCACGCATCCGCTAAATAAATCATGGCACGTTCTTGGTTTGGGTTATAATCCAAGCGTAGATCGATCCGAGATTGATAGTGCAGCAGTTGTACACTACAATGGCAACATGAAACCATGGTTGGAGATTGCCATGACAAAGTATAGGTCTTACTGGTCCAAATATGTGAAGTATGATCATCCCTATCTTCGGAACTGTAAGCTACATGAGTAA 2049 0.4202 MAPKRGISFSRSRSSSGKLSSSSSSSSSHFPVLAFVILCVMAPMIFFLGRGLYAADQDDFSAVPSNQVVTWRGWQALQNLKSFFPKEVLDVIVSSTNDTGPLSLDNFRKNNMSASWRVVELETSNATNEPKTDDRQEKPKLKDGKSSADGRTRWIDSPTQQARRQLIGKRRERRAAELVKLNDELIAKLENSAIERSKSVESAVLGKYSIWRKEVEYENADSTVRLMRDQNIMARVYLSIAKMKNKLELFQELQTRLKESKRALGDATSDADLNRSAHEKIKAMGQVLSKAREQLYDCKLVSGKLRAMLQTADEHVRSFKKQSTFLSQLAAKTIPNGIHCLSMRLTIDYYLLPPEKRKFPGSENLEDPSLYHYALFSDNVLAASVVVNSTITNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPGKATIHVENVDEFKWLNSSYCPVLRQLESATMREYYFKAGHPNTLSSGASNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWAVNLQGKVNGAVETCGASFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLKEWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYNPSVDRSEIDSAAVVHYNGNMKPWLEIAMTKYRSYWSKYVKYDHPYLRNCKLHE 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02744 682 Coils Coil 240 270 - -
Aip02g02744 682 Pfam Glycosyl transferase family 8 340 656 IPR002495 GO:0016757
Aip02g02744 682 PANTHER HEXOSYLTRANSFERASE 24 682 - -
Aip02g02744 682 MobiDBLite consensus disorder prediction 127 150 - -
Aip02g02744 682 CDD GT8_like_1 371 669 - -
Aip02g02744 682 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 24 682 IPR029993 GO:0047262
Aip02g02744 682 SUPERFAMILY Nucleotide-diphospho-sugar transferases 371 679 IPR029044 -
Aip02g02744 682 MobiDBLite consensus disorder prediction 1 27 - -
Aip02g02744 682 MobiDBLite consensus disorder prediction 122 163 - -
Aip02g02744 682 MobiDBLite consensus disorder prediction 8 27 - -
Aip02g02744 682 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 373 674 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02744 Aip-Chr2 103334502 103339081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02744 1 682 Glycosyltransferase AT3G61130 73.285 0.0 1040
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02744 K13648 - gmx:100811181 1105.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02744 02 103334502 103339081 Aip02g02744 02 103334502 103339081 ECH
Aip04g02619 04 114638995 114644045 Aip02g02744 02 103334502 103339081 PCT