Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02473 ATGAAGAGATTGCAACTAGGCACAATTTCTTTGGCCCTTCTGATTATTCTTACAAAATCTTCAATTGCCAATGCATTAGAAGATGGCAGTATTAAGAATGAAGAATCTGACAAGGAAGAGCAAAATCATGTTCCAAATTCTATCTCAAGTTATGGGATTGAAACGGTGGGGGAGATGGAAGAAGATGAATGGGAAATGGTGCAAAAGAGAGGGAACCAATTTGTGGTGAATGAGAAACCATTTTACATAAATGGATTCAACACATACTGGCTGATGGTGTTTGCTGTGGATGAGTCAACAAGAGGGAAGGTCACTGAGGTGTTCCAACAAGCTTCCTCAGTTGGCATGACCGTTTGTAGGACTTGGGCCTTCAATGATGCCCAATGGAGGGCCCTACAAAAATCTCCATCCGTTTATGATGAAGATGTCTTCAAGGCATTGGATTTTGTGGTAAGTGAAGCAAAGAAATACAAGATCAGGTTGATATTATCACTGGCAAACAATTGGGAAGCATATGGTGGAAAAGCACAGTATGTGAAATGGGGAAAAGATGCTGGCCTCAATGTCTCTTCTGATGACGACTTCTTCTCACATCCAACTCTTAGAACCTACTACAAGAACCATGTTAAGACGGTGTTGAATAGAGTGAACACATTGACAAATATGACATACAAGGAAGATCCAACCATATTTGCATGGGAATTGATGAATGAACCTCGATGCACCTCAGATCCCGCTGGTGATAAGCTTCAGGATTGGATACAAGAAATGGCATTCCATGTGAAGAAGATTGATCCAAAGCACCTAGTAGAAATTGGAGTTGAAGGATTTTATGGGCCCTCAACCCCTCACAGAACTCAGTTCAATCCAAATTCATATGCAACACAAGTTGGAACTGATTTCATTAGGAACCACCAGGTTCTTGGTGTTGACTTTGCTTCTGCTCACATATATGCTGACTCTTGGATCTCACAGCAAATTTCCGAAAGCCATCTAGAATTCATAACATCATGGATGCAATCCCACATAGAAGACGCGGAAAAGCATCTGGGAATGCCAATAATCTTTGCAGAATTCGGTGTATCATCAAAGGACCCTGGCTACAATGCAACATACAGAGACAACCTTATAACAAGTGTGTACAAAACAATCTTAAACTCCACAAAGAAAGGAGGAAGTGGCGGCGGAACACTCTTGTGGCAGGTGTTTCCTGAAGGAACTGATAACATGGATGATGGTTATGCTATTGTGCTCTCTAAGTCTCCTTCTACTTCTGCTGTTGTGTCACTTCAGTCCTCAAGGCTTGCTTTGTTCAATTCAATGTGTTCTTCTAAATTCCAGTGGAGTTGTAAGAAGAAGAAAGTCATCTATGATCCTCATGATGAATTCTAG 1392 0.4116 MKRLQLGTISLALLIILTKSSIANALEDGSIKNEESDKEEQNHVPNSISSYGIETVGEMEEDEWEMVQKRGNQFVVNEKPFYINGFNTYWLMVFAVDESTRGKVTEVFQQASSVGMTVCRTWAFNDAQWRALQKSPSVYDEDVFKALDFVVSEAKKYKIRLILSLANNWEAYGGKAQYVKWGKDAGLNVSSDDDFFSHPTLRTYYKNHVKTVLNRVNTLTNMTYKEDPTIFAWELMNEPRCTSDPAGDKLQDWIQEMAFHVKKIDPKHLVEIGVEGFYGPSTPHRTQFNPNSYATQVGTDFIRNHQVLGVDFASAHIYADSWISQQISESHLEFITSWMQSHIEDAEKHLGMPIIFAEFGVSSKDPGYNATYRDNLITSVYKTILNSTKKGGSGGGTLLWQVFPEGTDNMDDGYAIVLSKSPSTSAVVSLQSSRLALFNSMCSSKFQWSCKKKKVIYDPHDEF 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02473 463 Pfam Cellulase (glycosyl hydrolase family 5) 77 375 IPR001547 GO:0004553|GO:0071704
Aip04g02473 463 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 9 456 - -
Aip04g02473 463 Gene3D Glycosidases 64 438 - -
Aip04g02473 463 SUPERFAMILY (Trans)glycosidases 66 430 IPR017853 -
Aip04g02473 463 PANTHER - 9 456 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02473 Aip-Chr4 110958813 110964630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02473 5 453 Glycoside Hydrolase AT5G01930 65.929 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02473 K19355 - gmx:100811794 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02473 04 110958813 110964630 Aip04g02473 04 110958813 110964630 ECH
Aip04g02473 04 110958813 110964630 Aip02g00620 02 9307387 9309408 PCT