Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00620 ATGGAGAATCAAAGGAGTGTTATTACCTTGATCCTTTTTCTGATCCTTACTAAAAGCGTAAGTTCAACTGAATTTGATAGCAGTGAATATGAAGAAGGGGAAAGCCATTCCATATCCTTCCAAAGCTCTAGGAGCGAAATGGGAGATGTCGAAGAAGGTGAATGGGAGATGGTGCAAACCAAGGGAAACCAATTTGTGGTGAGGGACCAACCTTTCTATGTGAATGGATTCAACACATACTGGCTGATGGTATTTGCTGCGGATGAGTCCACCAGAGGAAAGGTCAGTGAGGTGTTCAAGCATGCATCCTCAGTAGGCATGACAGTTTGCAGGACTTGGGCCTTCAACGACGGTCAATGGCGAGCCCTTCAGAAATCTCCATCAGTTTATGACGAACGCGTCTTCAAGGCACTAGATTTTGTGGTGAGTGAAGCAAAGAAATACAGAATAAGGCTCATACTGTCATTGGTAAACAACTGGGAGGCTTATGGCGGCAAAGCGCAGTATGTCAAATGGGGAACTGCTGCCGGCCTCAACTTGACCTCCGATGACGACTTCTTCTCACATCCAACTCTCAGAAGCTACTACAAGAACCATGTTAAGACGGTGCTCAACAGAGTAAATACGTACACAAACATCACCTACAAGGAAGACCCTACAATTTTCGCTTGGGAACTCATGAATGAGCCTCGATGTATCTTGGATTCCTCAGGTGATACATTACAGGAATGGATAAAAGAAATGGCATTCTATGTGAAGAGCATTGATACAAAGCACCTAGTGGAGATTGGTCTTGAAGGATTTTACGGACCCTCAACACCTCAAAGAGTTCAGTTCAACCCAAACGTATTTGCTCAACAGGTTGGAACTGATTTTATCAGGAACCACCAGGTTCTCGGTGTAGACTTTGCTTCTGTTCACATCTATCCAGACTCTTGGATTTCACAATCAATTGCTGATACCCATCTCCCATTCATAAAGTCTTGGATGGAAGCCCACATCGAGGATGCTGAAAAGTACCTTGGAATGCCCGTTGTTTTTGCCGAGTTTGGTGTATCTTCAAAAGATCCTGGTTACAATTCATCATACAGAGACAACCTCATAAACACAGTGTACAAGACCATCCTTAACTCCACAAAGAAAGGAGGTAGCGGGGCTGGAAGCCTTTTGTGGCAGCTCTTTCCTGATGGAACAGACTACATGGATGATGGATATTCAATTGTTCTCTCAAAATCTCCTTCCACCTCAAGCATCATATCCCTTCAATCCACAAGGCTTGCTCTGTTCAACTCCTTGTGTTCTAAGAGATGTCACTGGAGTTGTAAGAAGAAAAGCATGTTCCAAAAAGTACTATATCATGATGAGCTCTAA 1371 0.4369 MENQRSVITLILFLILTKSVSSTEFDSSEYEEGESHSISFQSSRSEMGDVEEGEWEMVQTKGNQFVVRDQPFYVNGFNTYWLMVFAADESTRGKVSEVFKHASSVGMTVCRTWAFNDGQWRALQKSPSVYDERVFKALDFVVSEAKKYRIRLILSLVNNWEAYGGKAQYVKWGTAAGLNLTSDDDFFSHPTLRSYYKNHVKTVLNRVNTYTNITYKEDPTIFAWELMNEPRCILDSSGDTLQEWIKEMAFYVKSIDTKHLVEIGLEGFYGPSTPQRVQFNPNVFAQQVGTDFIRNHQVLGVDFASVHIYPDSWISQSIADTHLPFIKSWMEAHIEDAEKYLGMPVVFAEFGVSSKDPGYNSSYRDNLINTVYKTILNSTKKGGSGAGSLLWQLFPDGTDYMDDGYSIVLSKSPSTSSIISLQSTRLALFNSLCSKRCHWSCKKKSMFQKVLYHDEL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00620 456 Gene3D Glycosidases 55 429 - -
Aip02g00620 456 PANTHER - 7 456 IPR045053 GO:0004553
Aip02g00620 456 SUPERFAMILY (Trans)glycosidases 56 414 IPR017853 -
Aip02g00620 456 Pfam Cellulase (glycosyl hydrolase family 5) 70 371 IPR001547 GO:0004553|GO:0071704
Aip02g00620 456 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 7 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00620 Aip-Chr2 9307387 9309408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00620 5 456 Glycoside Hydrolase AT5G01930 68.282 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00620 K19355 - gmx:100801139 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02473 04 110958813 110964630 Aip02g00620 02 9307387 9309408 PCT