Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02066 ATGCAGCTCTTCATCACAAAGAGAAAAAATTGTAACAATAAGAGCATGTTTGATCATAGGGTTCTTAAACATGCCATGATTTCTATCATATCTCTAATAATTTTCTCAGCCATATTTTTCCTTATTCATGTTGATACTGTTATCCAACATGATGATGATTCCCTTCATCACCCTTCTTCTTCTTCTTCATCAAGCAAAGGAATAATTCCTCAAAAGTTGAAAGAATCTCACACGGAGATAAAACTAGAAGCAGGGGTAGTAAGGTCAACAACAACTCTTACTGTGTCTCACATAGCTTTGAATTCACTGCAAGAAGGGAATCATAGAGAAGTTGAAATAATTGATAATGATGATGATGAAGAAAGAGGGAATAGACTACTGGTTGCTCCAATTAATGTGAGTGAATCAGAAAGGATTTCTTGGTTTAGAGGGAAGATGCATGAATTCAAGATTCTCAAGTCAGACAAACTTGCAAGGCAATTCCATGGCAGAGTTCTTGGATTCTTTGGTAATAATAATGGATGTGAGGGGCAGTTCTTCATGACATGGATTTCACCAGCGACTTCATTTGGGTCAAGGGAATTGTTGTCTGTTCAAAGTGTCTTCAAGGTACATCCCAAGGCTTGTTTGGTAATTTTGTCAAGAAGCTTGGATTCGGTTCGCGGGTATCGGGTTCTGAAACCGGTTATTGATCTCGGGTTCAAAGTCCAGGCAATCACCCCAGACTTGTCATTTCTGTTCAAGGGAACGCCAGCTGAATATTGGTTTCATCAATTGAGGAAAGGAAAGAAGGACCCTGGTGAGATCCCTTTGTTTCAGAATCTCTCTAATCTCATAAGACTCTCAGTGCTATACAAATATGGTGGTGTTTACTTAGACACTGATTTCATACTCCTTAAGCCTTTCACTGGGTTGAGGAACTGTATTGGTGCACAAAGCATGGATTTAGGTCAAAAGCACTGGACAAGACTAAACAATGCAGTTCTTGTATTTGATATGAACCATCCACTTTTGTTGAGATTCATTAAGGAGTTTGCATTGACTTTTGATGGGAACAAATGGGGGCATAATGGTCCTTACCTTGTTTCAAGGGTGGTTAGTAAATTGGGGAAGAAGTCAGGTTTCAATTTTACAATATTGCCTCCTATGGCATTTTATCCAGTGGATTGGAATAAGATTGATGGGCTTTTTAGGAAGCCCAAAACAAGAAGTGAATCAAAATGGGTTGAAGCAAAATTGGTTCAGCTTAGTGGTGAGTCATATGGGGTCCACCTATGGAACAAGCAGAGTGGGAGATTGGTGATTGAAGAAGGAAGTATCTTGGGAAAACTCGTGTCTCATAATTGTGTCATTTGCAAAACTCTATTATAG 1371 0.3902 MQLFITKRKNCNNKSMFDHRVLKHAMISIISLIIFSAIFFLIHVDTVIQHDDDSLHHPSSSSSSSKGIIPQKLKESHTEIKLEAGVVRSTTTLTVSHIALNSLQEGNHREVEIIDNDDDEERGNRLLVAPINVSESERISWFRGKMHEFKILKSDKLARQFHGRVLGFFGNNNGCEGQFFMTWISPATSFGSRELLSVQSVFKVHPKACLVILSRSLDSVRGYRVLKPVIDLGFKVQAITPDLSFLFKGTPAEYWFHQLRKGKKDPGEIPLFQNLSNLIRLSVLYKYGGVYLDTDFILLKPFTGLRNCIGAQSMDLGQKHWTRLNNAVLVFDMNHPLLLRFIKEFALTFDGNKWGHNGPYLVSRVVSKLGKKSGFNFTILPPMAFYPVDWNKIDGLFRKPKTRSESKWVEAKLVQLSGESYGVHLWNKQSGRLVIEEGSILGKLVSHNCVICKTLL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02066 456 Gene3D - 225 379 - -
Aip04g02066 456 Pfam Glycosyltransferase sugar-binding region containing DXD motif 192 313 IPR007577 -
Aip04g02066 456 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 16 454 IPR044789 -
Aip04g02066 456 Pfam Alpha 1,4-glycosyltransferase conserved region 331 453 IPR007652 -
Aip04g02066 456 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 16 454 - -
Aip04g02066 456 SUPERFAMILY Nucleotide-diphospho-sugar transferases 178 453 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02066 Aip-Chr4 96246346 96248781 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02066 96 452 Glycosyltransferase AT2G38150 53.073 3.44e-137 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02066 K01988 - gmx:100812965 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02066 04 96246346 96248781 Aip02g02243 02 94235450 94236703 PCT