Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02243 ATGTTTGACCCTAGACACCTTAAAAGTGCCAAGTTACTTTTATCCTCTCTGTTTATATTCTCTGCCATAATTTTTGTTATCCATGCATATAGTATCAATTACCATGATTTCCTACACTCTGCTACAAATAAAGAACCTTCAGAGAATTTGCAAGCTCAGAGTCACAGATTCAAAGAGCAAATAAGATCAACACTTTCTAATCTGCCTTTACACTCCATTCAAGAAGAGAATGTTAGAATTCAAGCTGGAAATCAGAATGATTTGGTTGCTCCACTCGGTGTGACAGAATTAGAGAGAATAGCTTGGTTTCGGAAAAACCTGCACAAGTTTGATATTCTCAAGTCAAACAACTCGACCCGCAGATTTCACAGCAGAGTTCTAGAATTCTTCAGCCGTGAATGCGAGGCTCAGTTTTTCATGACTTGGATTTCGCCAGCAGGCTCGTTTGGTGTAAGAGAATTGATGTCCGTGGAAAGTGTTTTTAAGGTTCATCCCGGCGCATGCCTTGTAATTTTGTCAAGAACTTTGGAGACCACGGACGGCTACACAGTGCTGAAACCGTTGCTCGACAGTAGGTTCAAGGTTCAGGTTGTGACCCCAGACTTGCCTATTCTGTTCAAAGGGACACCGGCCGAAGCTTGGTTTCGTGAGTTAATAAAAGGTAAGAAGGATCCAGGTGAGATTCCTTTGTCACAAAATCTATCTAATCTGATAAGACTTGTAGTGCTCTATAAATATGGTGGAATCTACATAGATACAGACTTTATTGTTCTAAAACCATTAACCGGGTTGCGGAATTCTATCGGAGCACAAAGCATGGATTTAAGATCTAAGCACTGGACTAGATTAAATAATGCTGTTCTGATTTTCGATATGAAACATCCACTTCTTCACGAATTCATTAGTGAATTTGCATTGACTTTTGATGGAAACAAATGGGGGCATAATGGTCCATACCTGGTTTCTAGAGTGATCAAGAGGCTGCTGAAAAGACCCAGTTTCATATTTAAGATCTTGCCACCTATGGCTTTCTATCCAGCTGATTGGAATAAGATAAGGGGGTTTCTCAGGAAGCCGAAAACTCAAACTGAATCGAAATGGGTAGAAGCCAAAGTGCTTCAGCTCTGTGCGGAGACTTATGGGATTCATCTATGGAACAAGCAAAGCAGAAGATTGACAATAGAAGATGGAAGCGTCATAGGAAAACTTGCATTAAATCATTGTGTCATTTGCAACCATATATTTAGTTCTTAG 1254 0.4011 MFDPRHLKSAKLLLSSLFIFSAIIFVIHAYSINYHDFLHSATNKEPSENLQAQSHRFKEQIRSTLSNLPLHSIQEENVRIQAGNQNDLVAPLGVTELERIAWFRKNLHKFDILKSNNSTRRFHSRVLEFFSRECEAQFFMTWISPAGSFGVRELMSVESVFKVHPGACLVILSRTLETTDGYTVLKPLLDSRFKVQVVTPDLPILFKGTPAEAWFRELIKGKKDPGEIPLSQNLSNLIRLVVLYKYGGIYIDTDFIVLKPLTGLRNSIGAQSMDLRSKHWTRLNNAVLIFDMKHPLLHEFISEFALTFDGNKWGHNGPYLVSRVIKRLLKRPSFIFKILPPMAFYPADWNKIRGFLRKPKTQTESKWVEAKVLQLCAETYGIHLWNKQSRRLTIEDGSVIGKLALNHCVICNHIFSS 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02243 417 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 3 417 - -
Aip02g02243 417 Pfam Alpha 1,4-glycosyltransferase conserved region 290 413 IPR007652 -
Aip02g02243 417 Pfam Glycosyltransferase sugar-binding region containing DXD motif 152 272 IPR007577 -
Aip02g02243 417 SUPERFAMILY Nucleotide-diphospho-sugar transferases 92 416 IPR029044 -
Aip02g02243 417 Gene3D - 137 340 - -
Aip02g02243 417 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 3 417 IPR044789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02243 Aip-Chr2 94235450 94236703 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02243 88 417 Glycosyltransferase AT2G38150 53.474 2.85e-135 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02243 K01988 - gmx:100781975 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02243 02 94235450 94236703 Aip02g02243 02 94235450 94236703 ECH
Aip04g02066 04 96246346 96248781 Aip02g02243 02 94235450 94236703 PCT