Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g02046 ATGGCCGCCACTTCTCTCTCTATAAATCCCTCTCTCTCCCCGAACTTTCGTTCATCTCCCTCCCCACCTTCTTCTTCAAATTCCGGTAAATTGCAACTCTTTCAGCCAATTGGAGCGAAACCGATTACTCTTTTCTGCAGGGGAGCGCGATTGTGCTCTCTGCAGAGTCCAAGGACATTCAAGAGTAGGAAAAGTGTGGTTCTTGGAGCTGGAAAAATGAGCATATCAGATCAAGAATTGCGTGAGGAGGAAGGAGAAGAGGGTCCTCCTTCTGAGAACCATTCAAGGCCTCGTCGAATTGCTCTCTTTGTTGAGCCTTCTCCTTTTGCATATGTCTCTGGATACAAAAATCGGTTCCAGAATTTTATTAAGCATCTCCGTGAAATGGGAGATGAGGTATTGGTTGTGACAACACATGAAGGAGTGCCCAAGGAATTTTATGGCGCTAAATTAATTGGATCCCGGAGTTTCCCCTGCCCGTGGTATCAGAAGGTACCTCTCTCCTTGGCTCTCAGTCCAAGAATAATTTCAGCGGTTGCCCGGTTCAAGCCTGACATAATACATGCGTCATCACCTGGCATAATGGTTTTCGGTGCTCTTATCATTGCAAAACTTCTCTCTGTTCCTATTGTCATGTCCTATCATACACATGTACCAGTTTACATTCCAAGATATACATTTAGCTGGCTGGTGAAACCCATGTGGTTGGTCATAAAATTTCTACATAGAGCAGCTGATCTCACTCTAGTTCCATCGGTTGCCATTGCAAGGGATCTCCTAGCAGCTAGAGTAACAGCAGCTAACAAGATTCGACTTTGGAACAAGGGTGTTGATTCTGACAGCTTCCATCCTCGATACCGCTCGCATGAAATGCGATTAAGACTGAGCAATGGTGAACCGGAGAAACCCTTGATAATTCATGTTGGACGGCTTGGAGTTGAGAAGAGTTTAGATTTTCTCAAAAGGATCATGGATAAGCTTCCTGAAGCACGAATTGCTTTTATTGGAGATGGGCCTTACAGGGAGGAGCTGGAGAAAATGTTTGAAGATATGCCTGTAGTATTCACAGGAATGTTGGGAGGCGAAGAACTCTCCCAAGCATATGCTAGTGGAGATGTTTTCGTTATGCCTTCGGAGTCAGAGACGCTTGGGCTTGTTGTTTTGGAGGCCATGTCTTCGGGGATTCCTGTGGTGGGAGCACGAGCCGGAGGAATTCCGGACATAATCCCTACAGATCAAGAGGGAAAAATTGGCTATCTCTACACTCCGGGAGATCTTGAAGACTGCATGAGCAAATTGGAGCCCTTGTTGCTTAACAGAGAGTTGAGGGAAACCATGGGAAAAGCTGCACGCCAAGAGATGGAGAAGTATGATTGGAGGGCAGCTACTCGAAAGATTCGCAACGAGCAGTACAGCGCTGCCATTTGGTTCTGGCGCAAGAAGAGAGCTCAACTGTTGAGACCCATTCAATGGGCCACAAAACGCATCTTCCCCTCTCCAGCAATCAACTATCGTTGA 1518 0.4644 MAATSLSINPSLSPNFRSSPSPPSSSNSGKLQLFQPIGAKPITLFCRGARLCSLQSPRTFKSRKSVVLGAGKMSISDQELREEEGEEGPPSENHSRPRRIALFVEPSPFAYVSGYKNRFQNFIKHLREMGDEVLVVTTHEGVPKEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISAVARFKPDIIHASSPGIMVFGALIIAKLLSVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIARDLLAARVTAANKIRLWNKGVDSDSFHPRYRSHEMRLRLSNGEPEKPLIIHVGRLGVEKSLDFLKRIMDKLPEARIAFIGDGPYREELEKMFEDMPVVFTGMLGGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGARAGGIPDIIPTDQEGKIGYLYTPGDLEDCMSKLEPLLLNRELRETMGKAARQEMEKYDWRAATRKIRNEQYSAAIWFWRKKRAQLLRPIQWATKRIFPSPAINYR 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g02046 505 MobiDBLite consensus disorder prediction 76 97 - -
Aip04g02046 505 MobiDBLite consensus disorder prediction 1 31 - -
Aip04g02046 505 Pfam Glycosyl transferases group 1 300 452 IPR001296 GO:0016757
Aip04g02046 505 PANTHER GROUP 1 FAMILY GLYCOSYLTRANSFERASE 19 504 - -
Aip04g02046 505 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 100 467 - -
Aip04g02046 505 PANTHER SULFOQUINOVOSYL TRANSFERASE SQD2 19 504 - -
Aip04g02046 505 CDD GT4-like 99 471 - -
Aip04g02046 505 Pfam Glycosyltransferase Family 4 117 280 IPR028098 -
Aip04g02046 505 Gene3D Glycogen Phosphorylase B; 277 457 - -
Aip04g02046 505 Gene3D Glycogen Phosphorylase B; 113 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g02046 Aip-Chr4 94970676 94975188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g02046 64 420 Glycosyltransferase AT5G01220 78.611 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g02046 K06119 - gmx:100780899 795.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02046 04 94970676 94975188 Aip04g02046 04 94970676 94975188 ECH
Aip04g02046 04 94970676 94975188 Aip02g02213 02 93419533 93424131 PCT