Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02213 ATGAACACTACTTCCACTTCTCTCTCTATAAATTCCTCTCTCTCTCCTCCTTTTCTCTCACCTGACACAAACACCACTTATTCTTCTTCTTTCTCTTTTCCCTCTTCCTCTTCTTCATACTACCCTCGTTTTGCTTCTGCCGGATTCTCTCTCCTCCAATCATTTGGACCAAAACCCATCACACCCATTTGCAAAAGATCAAATTTTTGCACCTTTCAAGGCTCAAACACTCTGAGAAGAAGGAAAAGTTCGTACCTTGGAGCTACCAACGAAAAAATGACCATAGCTGGGGATAGTTTGCTTCAGGTTGTTGAGGAAGAAGAAGATTCTCCTCCTGAGTCTGCTTTGCTTGATCCTGAGAACAATTCTAGGCCAAGAAGAATCGCACTTTTCGTTGAGCCTTCTCCATTTGCGTATGTTTCAGGATACAAAAACCGGTTTCAGAATTTTATAAAATACCTTCGCGAAATGGGAGATGAGGTAATGGTTGTGACAACACATGAAGGTGTACCCAAGGAATTTTATGGAGCAAAATTAATCGGATCGCGAAGCTTCCCTTGTCCTTGGTATCAGAAGGTACCCCTCTCTTTGGCACTTAGTCCAAGAATAATATCAGCCGTTGCCGAGTTTAAGCCTGACATAATACACGCATCATCACCAGGAATAATGGTGTTCGGTGCTCTTGCAATTGCAAAGCTTCTTAGTGTTCCCATTGTCATGTCTTATCACACCCATGTACCAGTATACATTCCAAGATACACCTTTAGCTGGCTGGTGCAACCCATGTGGTGGGTCATAAAGTTTCTGCACAGAGCTGCAGACCTGACTTTGGTGCCATCGGCTGCCATTGCAAGGGATCTTGAAGTAGCTAGAGTAACAGCAGCTAACAAGATTCGCCTTTGGAACAAGGGTGTCGATTCTGAAAGTTTCCATCCCAAATTCAAGTCCCATGAAATGCGAATAAGACTGAGCAATGGCGAGCCTGAGAAGCCCTTGATAGTTCACGTAGGACGGCTTGGAGTCGAGAAAAGTCTAGATTTCCTCAAAAGTGTCATGGATAGGCTTCCTGAAGCAAGAATTGCTTTTATAGGAGATGGACCATACAGAGAGGAGCTGGAGAAAATGTTTCAAGGCATGCCTGCAGTATTCACAGGAATGTTAGGAGGGGAAGAACTGTCTCAAGCTTATGCCAGTGGAGACGTCTTTGTGATGCCTTCGGAATCCGAGACACTCGGCCTGGTTGTCTTGGAGGCCATGTCTTCAGGGATCCCGGTTGTGGGAGCACGTGCCGGTGGTGTCCCAGACATAATCCCTGAAGACCAAGATGGCAAGATTGGCTATCTCTACACTCCAGGCGATCTAGAAGACTGTTTGAGCAAACTAAAACCTCTCTTGTACGACCACGAGTTGAGGAAAACCATGGGACAAGCTGCCCGTCTGGAGATGGAGAAGTACGACTGGAGAGCAGCCACAAAGAAGATCCGCAACGAAAACTACAACGCGGCCATTTGGTTCTGGCGCAAGAAAAGGGCTCAACTTTTAAGACCCTTCCAATGGCTCGCGAAACGGATTTTCCCATCTCCAGAGGTCAATGTATAG 1599 0.459 MNTTSTSLSINSSLSPPFLSPDTNTTYSSSFSFPSSSSSYYPRFASAGFSLLQSFGPKPITPICKRSNFCTFQGSNTLRRRKSSYLGATNEKMTIAGDSLLQVVEEEEDSPPESALLDPENNSRPRRIALFVEPSPFAYVSGYKNRFQNFIKYLREMGDEVMVVTTHEGVPKEFYGAKLIGSRSFPCPWYQKVPLSLALSPRIISAVAEFKPDIIHASSPGIMVFGALAIAKLLSVPIVMSYHTHVPVYIPRYTFSWLVQPMWWVIKFLHRAADLTLVPSAAIARDLEVARVTAANKIRLWNKGVDSESFHPKFKSHEMRIRLSNGEPEKPLIVHVGRLGVEKSLDFLKSVMDRLPEARIAFIGDGPYREELEKMFQGMPAVFTGMLGGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGARAGGVPDIIPEDQDGKIGYLYTPGDLEDCLSKLKPLLYDHELRKTMGQAARLEMEKYDWRAATKKIRNENYNAAIWFWRKKRAQLLRPFQWLAKRIFPSPEVNV 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02213 532 Gene3D Glycogen Phosphorylase B; 332 490 - -
Aip02g02213 532 CDD GT4-like 127 497 - -
Aip02g02213 532 PANTHER SULFOQUINOVOSYL TRANSFERASE SQD2 34 531 - -
Aip02g02213 532 PANTHER GROUP 1 FAMILY GLYCOSYLTRANSFERASE 34 531 - -
Aip02g02213 532 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 128 495 - -
Aip02g02213 532 Pfam Glycosyl transferases group 1 328 480 IPR001296 GO:0016757
Aip02g02213 532 Pfam Glycosyltransferase Family 4 145 308 IPR028098 -
Aip02g02213 532 Gene3D Glycogen Phosphorylase B; 127 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02213 Aip-Chr2 93419533 93424131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02213 79 448 Glycosyltransferase AT5G01220 77.898 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02213 K06119 - gmx:100780899 884.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02213 02 93419533 93424131 Aip02g02213 02 93419533 93424131 ECH
Aip04g02046 04 94970676 94975188 Aip02g02213 02 93419533 93424131 PCT