Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01424 ATGATGACTCACAGGGGTACCGATGACAAGGAAGCATTTGTTGGGAGCGGCCATTGTTCTTCTGACTTTGTTGTTGTGCCAATGGCATCGGAAATAGAAACTACCAATCACGTAGAATATCCTCCTAAAGAACGTCACATGCGCACAATATTACATGCAACATCAGCAAGTCAACCAAGAGCAGATGTGGCATACTGCATTCACAAACTTTCCAAAAGGCTTTACAAGACAAAAAACTGGATAGTTGCTATAAAGACATTGATAGTGATGCATAGGTTATTGAGAGAGGGTGATCCTACTTTCAGAGAAGAGCTCCTAAACTACACACGCAGGGGACACTTTCTCCAAATATCCAATTTCAAAGATGACACCACTCCTCAAGCTTGGGATTGTTCTGCATGGGTTCGAACCTATGCACTTTTTCTACAAGAAAGACTTGAATGCTTTAGAACACTCAAATACGACATTGAAACAGAGCGTTTCGTAAAATCACCAACTTCTTCAGCTAAACCACTTACAAGAACTCGGTCTTTGGGTGCTGCAGAATTGTTGGAGCAGTTACCTGCATTGCAGCAACTCCTGCAACGCCTTATAGGTTGCCAGCCTGAAGGATGCGCTTATGGAAATTATCTTGTACAATATGCATTGGCCCTGGTATTGAAAGAGAGCTTCAAAATATATTGTTCATTGAATGATGGAATCATCAATCTTGTGGATGTGTTCTTTGATATGGAAAGACATAACGCAGTGAGGGCTCTGAAAATTTATAAAAGAGCTGGCCAACAGGCTGAGCATCTTGCTCAGTTTTATGAATACTGCAAAGGGTTGGAGATTGCAAGGAATTTCCAATTTCCATGTCTAAGACAGCCACCCCCCTCTTTCCTTGCAACAATGGAAGAATACATTGGAGAAGCACCACAAACTAGCTCTGTTCATCAAAGACTGGAATATCGTGAAGCTGATCTATCACCTTCTAGAGAAGATCCTCCAGAAACCGACGAGCCCGAAGAGCCTCAAGAAACTGAAGGAGAAGAAGAGAATGAGGAAGAACCAGTTGTCAACGGAGAGCCAAATCCTGTGGAAGTGGAAGAGGCTGCTCCGCTGATATCGAATAATTGGATCGATGATGACTTGCTGGGTCTGCGTGAAATAAACCCTCAAGCTGTTGAACTTGAAGAAAGAAATGCTTTGGCCCTTGCAATTGTACAACCTGGTGGAAATAATTCAAACAATCTTGCTTTGAACAACATTGGTGACACTACTGGTTGGGAACTAGCACTGGTTACAGCACAAAGCAACCATACTAGCCAAGCGCCAGATCGAAATATGGCTGGTGGATTTGACAAGTTATTACTAGATAGTTTATATGAAGATGAGAATGCAAGAAGACAACTCCAGCTCCAAAATGCAGGTTATGGATATGGTGGAAATGGAATGGCCATACAAAACCCATTTGAAAATGATAATGATCCATTTGCAGTGTCCAACAACATAGCACCCCCAACCAGTGTTCAATTGGCATTGCAACAACAGCAACAACAAACGCTGTTCCAACAACAACAGAACAATAACATGATGATGACGCCTTACCAGCAGCAACCATATTACAATCCATTTGGAGACCCTTTACCAGTGCCTAACTATGCATATGGTTCTACACCAGCACAGGGAAATTATAATTTAATGTAG 1689 0.421 MMTHRGTDDKEAFVGSGHCSSDFVVVPMASEIETTNHVEYPPKERHMRTILHATSASQPRADVAYCIHKLSKRLYKTKNWIVAIKTLIVMHRLLREGDPTFREELLNYTRRGHFLQISNFKDDTTPQAWDCSAWVRTYALFLQERLECFRTLKYDIETERFVKSPTSSAKPLTRTRSLGAAELLEQLPALQQLLQRLIGCQPEGCAYGNYLVQYALALVLKESFKIYCSLNDGIINLVDVFFDMERHNAVRALKIYKRAGQQAEHLAQFYEYCKGLEIARNFQFPCLRQPPPSFLATMEEYIGEAPQTSSVHQRLEYREADLSPSREDPPETDEPEEPQETEGEEENEEEPVVNGEPNPVEVEEAAPLISNNWIDDDLLGLREINPQAVELEERNALALAIVQPGGNNSNNLALNNIGDTTGWELALVTAQSNHTSQAPDRNMAGGFDKLLLDSLYEDENARRQLQLQNAGYGYGGNGMAIQNPFENDNDPFAVSNNIAPPTSVQLALQQQQQQTLFQQQQNNNMMMTPYQQQPYYNPFGDPLPVPNYAYGSTPAQGNYNLM 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01424 562 PANTHER CLATHRIN ASSEMBLY PROTEIN 18 547 IPR045192 GO:0048268|GO:0072583
Aip04g01424 562 ProSiteProfiles ENTH domain profile. 18 156 IPR013809 -
Aip04g01424 562 MobiDBLite consensus disorder prediction 305 358 - -
Aip04g01424 562 Gene3D ANTH domain 170 320 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Aip04g01424 562 Gene3D - 31 156 IPR008942 -
Aip04g01424 562 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 18 547 - -
Aip04g01424 562 SUPERFAMILY ENTH/VHS domain 33 157 IPR008942 -
Aip04g01424 562 Pfam ANTH domain 35 302 IPR011417 GO:0005543
Aip04g01424 562 SUPERFAMILY GAT-like domain 174 304 - -
Aip04g01424 562 MobiDBLite consensus disorder prediction 330 352 - -
Aip04g01424 562 CDD ANTH_N 32 149 - -
Aip04g01424 562 SMART enth_2 26 156 IPR013809 -
Aip04g01424 562 MobiDBLite consensus disorder prediction 314 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01424 Aip-Chr4 28212208 28221294 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01424 K20044 - gmx:100783084 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03318 01 136301145 136304973 Aip04g01424 04 28212208 28221294 PCT