Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03318 ATGGGAACGTTTCAGAGTTGGAGAAGAGCCTACGGTGCTCTCAAGGATTCCACCAAGGTTGGCTTAGCCAAGGTCAATAGCGAATACAAGGAATTGGATATTGCAATTGTAAAAGCTACCAGTCACGTAGAATATCCCCCCAAGGAACGTCATGTTCGAAAAATATTCTATGCCACAGCAGCACATCAACCACGGGCAGATGTGGCATACTGCATACACACACTCGCCAAGAGACTTTCCAAGACAAGAAATTGGATAGTTGCCATAAAGACATTGATAGTTATCCATAGGATTTTGAGAGAGGGTGATCCTACTTTCAAAGAAGACCTTGTCAACTATTCAAGAAGGGGACACATTCTCCAAATATCCAATTTCAAAGATGACTCAAGCACCCTAGCTTGGGACTGTTCTGCATGGGTTAGAACCTATGCACTGTTTTTAGAAGAAAGGCTTGAATGTTATAGAGTCCTTAAGTATGACATAGAGTCAGATCGTTTAAAAAAACCGACACAAGGGCAGGGTTTAGCTAAGGTACAAAGCAGAACACGGTCATTGCCTACTGAAGATCTATTGGAGCAACTGCCTGCACTGCAGCAACTTCTATACCGCCTTATTAATTGTCGGCCTGATGGAGGAGCTTACAGCAATTACCTAGTGCAATATGCTTTGGCCCTGGTATTGAAAGAGAGCTTCAAAATATATTGTGCAGTCAATGATGGAATCATCAATCTTGTGGATGTGTTCTTTGATATGCAAAAACATGATGCCAGGAAGGCTTTGCTTATTTACAAAAGAGCTGGCCATCAGTGCGATCAACTTGCTAATTTCTATGAATACTGCAAGGGCTTGGATCTTGCTAGGAACTTCCAATTCCCAACTCTGAGACAGCCACCTTCCACTTTTCTTGGTACAATGGAAGAGTACATCAAGGAAGCACCAGAGGCAGGCATGCCTAGAAAGAACCTGGAGCCTAAGGAAAAGGAGGAATCATCCAAAGAAGAAGAACCAGAAACCGAAGAGCACGAAGAGGACGAAGAGCCTCAAGAAAATGAGAAACAAGAAGAAGAAATCCAGGAAGAACCTGAACCACAGCCGGAGGAACTAGAGAAGGCCGAACCCGCTCCTCTGATATCAACTGGTGATGATTTGCTGGGTCTACATGAAATAAATCCAAAAGCTAGAGAACTAGAGGAGACCAATGCTTTGGCACTTGCAATTGTACAACCTGGTGGAAACAACATTCCGAGGGATCTTGCATTGAGTAACATTGGTGGGACTACAGGTTGGGAACTTGCACTGGTTACGGCACCAAGTAACCATACCAGCCAAGCAATAGACCGAAAAATGGCTGGTGGATTTGATAGGCTACTACTAGAAAGCTTGTATGAAGATGAAAACTCCAGAAGACAACTTCAGCTCCAAAATGCAGGTTATGGATACGGAGGAACAGCTATTCATAATCCATTTGATCAATATAATAGTAATCAGTATGATCCATTTGCAGTGTCCAACAACATAGCACCTCCAACCAATGTGCAATTGTCATTGATGGCTCAGCAACATCAACAGCAGCAAATGATGTTCCAACAGCAACAAATGATGTATCCACAACAACAACAACAACAACAACAACAACAACAGCAACAACAAATGATGTACCATCAAAATAACATGATGATGGTCCCATATCAGTCTCAATACCCTCAACAGATGCAATTTATGGACTCTTCTAATCCATTTGGAGATCCCTTACCTGTTCCCACCTATAAGCACACTTCCATGCAAGGAAATTACAATTTGTTGTAG 1806 0.4252 MGTFQSWRRAYGALKDSTKVGLAKVNSEYKELDIAIVKATSHVEYPPKERHVRKIFYATAAHQPRADVAYCIHTLAKRLSKTRNWIVAIKTLIVIHRILREGDPTFKEDLVNYSRRGHILQISNFKDDSSTLAWDCSAWVRTYALFLEERLECYRVLKYDIESDRLKKPTQGQGLAKVQSRTRSLPTEDLLEQLPALQQLLYRLINCRPDGGAYSNYLVQYALALVLKESFKIYCAVNDGIINLVDVFFDMQKHDARKALLIYKRAGHQCDQLANFYEYCKGLDLARNFQFPTLRQPPSTFLGTMEEYIKEAPEAGMPRKNLEPKEKEESSKEEEPETEEHEEDEEPQENEKQEEEIQEEPEPQPEELEKAEPAPLISTGDDLLGLHEINPKARELEETNALALAIVQPGGNNIPRDLALSNIGGTTGWELALVTAPSNHTSQAIDRKMAGGFDRLLLESLYEDENSRRQLQLQNAGYGYGGTAIHNPFDQYNSNQYDPFAVSNNIAPPTNVQLSLMAQQHQQQQMMFQQQQMMYPQQQQQQQQQQQQQQMMYHQNNMMMVPYQSQYPQQMQFMDSSNPFGDPLPVPTYKHTSMQGNYNLL 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03318 601 SUPERFAMILY GAT-like domain 180 311 - -
Aip01g03318 601 MobiDBLite consensus disorder prediction 312 334 - -
Aip01g03318 601 SMART enth_2 30 161 IPR013809 -
Aip01g03318 601 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 534 IPR045192 GO:0048268|GO:0072583
Aip01g03318 601 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 1 534 - -
Aip01g03318 601 Pfam ANTH domain 31 311 IPR011417 GO:0005543
Aip01g03318 601 Gene3D ANTH domain 176 327 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Aip01g03318 601 MobiDBLite consensus disorder prediction 335 366 - -
Aip01g03318 601 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Aip01g03318 601 MobiDBLite consensus disorder prediction 312 382 - -
Aip01g03318 601 Gene3D - 8 161 IPR008942 -
Aip01g03318 601 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Aip01g03318 601 CDD ANTH_N 32 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03318 Aip-Chr1 136301145 136304973 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03318 K20044 - gmx:100786060 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03318 01 136301145 136304973 Aip04g01424 04 28212208 28221294 PCT