Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01369 ATGGGATGTTCTCAATCAAGGTTGGAAGATGAAGAGGCAGTTCAAATTTGCAAAGATAGAAAGAATTTCATCAAACAAGCTGTTGAACAAAGAACTCACTTCGCCACCGGACACATAGCCTACATCCAATCCCTTAAAAGAGTCTCGGCCGCTCTTCGAGAATACATCGAGGGAGACGAGCCTCGTGAGTTCTCGTTGGACACAGTCATTGCCCCTCCTTTTGCAGCTGGGAAGAAGACTTGCCCTGGCTTCATTCCTATTTCATCAAAATCGTTCACACCTGCAGCAATTGAGTTCGGAGTTGGACCAAATTCTACACTGAAAGTGAATTACTTAAGGCCTGGTGGTAATCCGGCGGTTTTGGTTGAGGAAAGGCCTCGATCTCCGGAAATGGTCCGGGTTGAAACATATTCTCCAATGCACCATCATTATGGCAATGATGGATTTTTTGGCATGCAATATTCACCTATGAATCCTTCAATTTTTCCTTATTCTCCAAGTAATAGGCCTAACATCCCTCCCCCTTCGCCTCAGAATTCGCAATGGGACTTCTTTTGGAACCCTTTTTCGTCGTTAGACAACTACGGTTACCCTTCAAGAAGTAGCCTTGATCAGACTATTATGGATGATGACTACAGAGGGCTTAGGCAGGTCCGAGAAGAAGAGGGAATACCGGACCTAGAAGAAGACGAAACTGAACAAGAAGATTATGTTGGGAAGAGAAATGTGGCTGAAGAAAGAACCAGAAACGTTGGAAACATTGGAAAAAATGGAAACACTTCCAAAGAAGAAGTATTAGTTGAAGATGTTGACGAGGATGAGGACGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAAGAAGAGGATGGAACAGATAATGAAACTGAAACTGAAGCTGAGCATGATGTCAAAGAATCACAAGCAAATGGAAGTGCAATTCTGGAAGTATCGAAATCACAGGCTGCAGGCCATATTGGATCCAGTCGTCGCGAAATGGCTATAGGTAAGCAAGAAGCTAAGGAAGACTCGCCGGGTTTTACTGTTTATGTAAACAGAAGGCCAACCAGCATGGCAGAAGTGATCAATGATCTTGAAGCTCAGTTCACAATCGTCTGCAATGCGGCAAATGATGTCTCAGTGTTGTTAGAGGCCAAGAGATCTCAGTATTTACCAACATCTAATGAATTGTCTGCCTCGAAGTTGTTGAACCCAAAAGCTCTATTCCGAACAGCATCCTCGCGCTCTTCCTCGTCAAGATTCTTAACAAATTGTCCGAGCATTAGAGAAGAAGTTTATGAGGGCACTAAAGATCTCATGGATGGGCACTGTATGATTTCCGGTAGTCACCATTCGACGTTGGACAGGTTAAACGCTTGGGAGAAAAAGCTTTATGATGAAGTCAAGGCCGGAGAACGGGTTCGAATGGCATATGAGAAGAAATGGAAGCAACTTAGGAACCAAGATGTAAAGGGAGAGGAACCCTCTTCTGCAGATAAAACAAGAGCAGCCATCAGAGATTTAGATACGCAGACAACGGTTTCAATACACACAGTTGAAGCTATTTCCAGGAGAATCGAAAAACTAAGGGATGAAGAGCTTCATCCCCAACTTCTTGAATTGGTACAAGGGCTAGCAAAGATGTGGAAAGTGATGGCAGAATGTCATCAGAAGCAGAAGAGAACCTTAGATGAAGCTAAGATGCTTCTAGCTTCTAAGTTACATGCCAGGAAACACTCCTCCATGTCGATGACTGATCCAACAAGGCTAGCCCGTTCGGCTTCAAATCTTGAATTCGAGATAAGAAACTGGCGAAACACCTTCGAGTCATGGATTACTTCGCAAAGATCCTATGTCCATGCGCTAGCCGGATGGCTTCTCCGGTGTGTGAGGTCCGAGCCTGACGTGTCAAAGTTACCATGCTCTCCTCAGACTTCTAGTGGTACTCACCCGTTATTCGGACTCTGTGTTCAGTGGTCAAGGCGACTAGACGCCATACACGAAACAGCAGTGCTTGATGGCATGGACTTCTTCGCAGCCGGCATGGGGTCGATCTACTCGCAGCAGTTGAGAGAAGATTCTAGGCAGAACTCGTTTGCTTCAAGACGAGAAAATGGAAACATGGAAATTGTGGAAGTTGGAAGAGTAGAAGAGGTAATGACTACGGAAAAATTAGCTGAAGTTGCTATTAAGGTGCTTTGTGCTGGAATGTCTGTTGCTATAAGCTCATTGGCAGAGTTTGCTTTTGATTCTTCTGAGGGATACAATGAAGTTGTGAAGCAATGGGAGAATGGCAAGTGTCTGGATTCTTCTTCCTCTGAGATTAGATCATAG 2334 0.4477 MGCSQSRLEDEEAVQICKDRKNFIKQAVEQRTHFATGHIAYIQSLKRVSAALREYIEGDEPREFSLDTVIAPPFAAGKKTCPGFIPISSKSFTPAAIEFGVGPNSTLKVNYLRPGGNPAVLVEERPRSPEMVRVETYSPMHHHYGNDGFFGMQYSPMNPSIFPYSPSNRPNIPPPSPQNSQWDFFWNPFSSLDNYGYPSRSSLDQTIMDDDYRGLRQVREEEGIPDLEEDETEQEDYVGKRNVAEERTRNVGNIGKNGNTSKEEVLVEDVDEDEDEEEEEEEEEEEEEEDGTDNETETEAEHDVKESQANGSAILEVSKSQAAGHIGSSRREMAIGKQEAKEDSPGFTVYVNRRPTSMAEVINDLEAQFTIVCNAANDVSVLLEAKRSQYLPTSNELSASKLLNPKALFRTASSRSSSSRFLTNCPSIREEVYEGTKDLMDGHCMISGSHHSTLDRLNAWEKKLYDEVKAGERVRMAYEKKWKQLRNQDVKGEEPSSADKTRAAIRDLDTQTTVSIHTVEAISRRIEKLRDEELHPQLLELVQGLAKMWKVMAECHQKQKRTLDEAKMLLASKLHARKHSSMSMTDPTRLARSASNLEFEIRNWRNTFESWITSQRSYVHALAGWLLRCVRSEPDVSKLPCSPQTSSGTHPLFGLCVQWSRRLDAIHETAVLDGMDFFAAGMGSIYSQQLREDSRQNSFASRRENGNMEIVEVGRVEEVMTTEKLAEVAIKVLCAGMSVAISSLAEFAFDSSEGYNEVVKQWENGKCLDSSSSEIRS 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01369 777 PANTHER UNCHARACTERIZED 1 776 - -
Aip04g01369 777 Coils Coil 263 295 - -
Aip04g01369 777 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Aip04g01369 777 PANTHER DUF630 FAMILY PROTEIN 1 776 - -
Aip04g01369 777 Pfam Protein of unknown function (DUF632) 358 682 IPR006867 -
Aip04g01369 777 MobiDBLite consensus disorder prediction 311 325 - -
Aip04g01369 777 MobiDBLite consensus disorder prediction 266 297 - -
Aip04g01369 777 MobiDBLite consensus disorder prediction 220 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01369 Aip-Chr4 26300932 26305273 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01369 1 230 Acyl Lipid Metabolism Gene Families AT2G27090 26.230 8.01e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01369 - - gmx:100780704 1144.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03308 01 136184500 136187694 Aip04g01369 04 26300932 26305273 PCT