Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03308 ATGGGATGTTCTCAATCAAGGTTGGATGATCAAGAATCAGTTCAGATTTGCAAAGATAGAAAGAGATTCATCAAACAAGCTGTTGAGCAAAGAGCACAATTTGCTTCTGGCCACATAGCATACATCCAATCCTTGAAAAGAGTCTCGGCTGCCATGCGAAATTACATTCAAGGAGACGAGCCGCACCAGTTCTCATTGGATTCTTTCATAACACCTGTGAAGAAGACTAGTCCAGCCTTCATTTCCATATCATCCAAGTCCTTCACTCCAACAACAATTGAGTTCTCATCCAATTCAACTTTGAAGGTCAATTATCTAAGGCCCAGTGGCAACCCGCCAATTTTGGTTGAGGAAAGGCCTCAATCCCCCGAAATGGTTCGAGTTGAAACATATTCTCCAATGGAGCAATATGCCATGGATGATGGTTTCTTTGCCATGCAATCCTCACCTATGAACTCATCAGCTTTTGCTTATTCTCCCAATAATAGGCCTAGTATTCCTCCCCCTTCTCCTCAAACATCTCAATGGGATTCCTTTTGGAACCCTTTTACATCATTAGACTATTACGGATACCCAACCAGAAGTAGCCTTGAAGAGACTATTGCGGATGATGAGGACCGAGGATTGAGGCAAGTTCGAGAAGCAGAAGGAATTCCAGACCTTGAAGAGGTTGAAACTGAAAAAGAAGATTTTGTTGGAAAGAGAAATGTTGCAGAAGAAAGAACCAGAACTGATATAAACTCCACCAAGGAAGAGGTCACGGTTGAAGACGAGGAGAAAGTGGACAGAACAAAAACTGAAATTGCACATGAGGTCAAAGAATCAAAAAAAGGCAGTGGCAGTGAAAGATTTCAAGTATCAAAAGTTCAAACTGCAGGTCAAGTTGAATCTACAAGCCATCAGGAAGTGGCAGTTGGTAATCAAGAAGCTAAGGTAGATACACCTGGTTTTACAGTTTATGTAAACCGAAGGCCGACAAGCATGGCAGAAGTAATCAGGGATCTTGATGTTCAATTCACAAAAGTTTGTAATGCAGCCAATGAATTTTCAGCGTTATTAGAGGTCAATAAAGCTCAAAATTCGTCGACGTCTAATGAGCTGTCAGCATCAAAATTGTTGAATCCCGTAGCGCTGTTCCGGTCTTCATCATCAAGATTTTTGAAGAATAATTCTTCAAGCACTGGGGATGATGGCTGCAAGGGCACTAGTGATCCCTTAGAGGAACAATGTATGTTTTCTGGTAGTCATCAATCAACATTGGACAGGTTATATGCTTGGGAGAAGAAGCTGTACGAGGAAGTTAGGTCTGGAGAACGTGTTCGAATTGCGTATGAGAAGAAATGTCTGCAACTCAAGAACCATGATGTGAAAGGAGAGGACCAATCTTATGTAGATAAAACAAGAGCAGCCATTAGAGATCTACATACCCAGATAACAATTTCAATTCACTCAATTGAAGCAATCTCCAAGAGAATTGAAACTCTAAGGGATGAAGAGTTGCATCCCCAACTTCTTGAATTGCTACAAGGGCTGGCAAAGATGTGGAATGTGATGGCAGAATGTCATCAGATGCAGAAAATAACCTTGGATGAAGCTAAGATTCTTCTAACTGGCACTGATGTCAGAAAACAGTCTGGCATGTCAATAACTGATCCACATAGGCTTGCTTGTTCTGCTTCAATTCTTGAAACTGAGTTGAGGAATTGGCGAAGCACCTTCGAGTCATGGATCACTTCTCAAAGATCCTACATTCGTGCACTTGCCGGCTGGCTGCTTCGGTGTATGAGATGCGAGCCTGATGCATCAAAGTTACTATGTTCTCCTCGCAGGTCAGGTAGCACTCACCCATTGTTTGGACTGTGTGTTCAGTGGTCAAGGCGACTGGACGCGATACAAGAATCAGTGGTGCTGGACGGCATAGACTTCTTTGCAGCTGGTATAGGGTCCTTCTATGCACAACAGCTAAAAGAAGATTCTCGACAAAATGTTGGTAGATCAACGGAAACCAATGAGAGGATGGAAATGGTGGAAGCTGGACCGGTAGAAGAGGCAATGAGTACTGAGCAATTGGCTGAAATCGCTATTAAGGTACTTTGTGCTGGAATGTCAGCTGCTATGAGTTCAATGGCAGAGTTTGCTGTTGATTCTGCTGAGGGATACAATGAACTTGTTAAGCAATGGGAGAATGAGAAGTTGCAGCAGCAACAAACTTGTGTGACTGGAACGTGA 2229 0.4275 MGCSQSRLDDQESVQICKDRKRFIKQAVEQRAQFASGHIAYIQSLKRVSAAMRNYIQGDEPHQFSLDSFITPVKKTSPAFISISSKSFTPTTIEFSSNSTLKVNYLRPSGNPPILVEERPQSPEMVRVETYSPMEQYAMDDGFFAMQSSPMNSSAFAYSPNNRPSIPPPSPQTSQWDSFWNPFTSLDYYGYPTRSSLEETIADDEDRGLRQVREAEGIPDLEEVETEKEDFVGKRNVAEERTRTDINSTKEEVTVEDEEKVDRTKTEIAHEVKESKKGSGSERFQVSKVQTAGQVESTSHQEVAVGNQEAKVDTPGFTVYVNRRPTSMAEVIRDLDVQFTKVCNAANEFSALLEVNKAQNSSTSNELSASKLLNPVALFRSSSSRFLKNNSSSTGDDGCKGTSDPLEEQCMFSGSHQSTLDRLYAWEKKLYEEVRSGERVRIAYEKKCLQLKNHDVKGEDQSYVDKTRAAIRDLHTQITISIHSIEAISKRIETLRDEELHPQLLELLQGLAKMWNVMAECHQMQKITLDEAKILLTGTDVRKQSGMSITDPHRLACSASILETELRNWRSTFESWITSQRSYIRALAGWLLRCMRCEPDASKLLCSPRRSGSTHPLFGLCVQWSRRLDAIQESVVLDGIDFFAAGIGSFYAQQLKEDSRQNVGRSTETNERMEMVEAGPVEEAMSTEQLAEIAIKVLCAGMSAAMSSMAEFAVDSAEGYNELVKQWENEKLQQQQTCVTGT 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03308 742 PANTHER DUF630 FAMILY PROTEIN 1 737 - -
Aip01g03308 742 Coils Coil 221 241 - -
Aip01g03308 742 Coils Coil 717 737 - -
Aip01g03308 742 Pfam Protein of unknown function (DUF632) 328 647 IPR006867 -
Aip01g03308 742 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Aip01g03308 742 PANTHER UNCHARACTERIZED 1 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03308 Aip-Chr1 136184500 136187694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03308 1 723 Acyl Lipid Metabolism Gene Families AT2G27090 26.459 2.41e-71 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03308 - - gmx:100818631 1009.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03308 01 136184500 136187694 Aip04g01369 04 26300932 26305273 PCT