Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01157 ATGGATTCAAAACCTCCATTGAAGTATCAGACATGGTTCTTGAAAGTTTCTATCCACTGTGATGGTTGCACGAGGAAAGTTAAGAAGGTTCTACAAAGCATTGATGGTGTTTTTACAACAATAATAGACCAACAGCAGCAAAAAGTAACCGTCACTGGAAGTGTAACTGTTGAAACCCTTCTCAGTAAACTTCTCAGAGCCGGTAAGCACGCCGAGATTTGGCCGGAAAATATCTCCGTCAAAGAGAACAAGAACAAGAGCAACACACACAAGTTGGAAAACGATAACCATTCTTATGCTGGAAAAACTACTCAAAATTGTAACAAAGTTATGAGCACGAGCAGCAACATAAAACCCGGTCAAAACTCACCGGAAAAGTCTCCGGCCGGCGACCGTGAATCGCCGCAGGAGCACAAGGGTGGCCAGAGTGGTGGTGGTGGTTCTGCTAAGAAGAAGAAAAAGAAAAGTCAGGGTGATGTTAGCGTGGATCATGGTTCCGCGGGTGCACCTGCACCTGCGGACACTGGATTTGGAACAAATCAAGCTCAAGCTCCTGTTCTCTTCGTCTCAAGTGAGCTCCAGCACACCGGTGCCACCTGTAGCAGCGTCTGTCCCCACCACCGCCGCACCTCTCTCTCTCCTTTTATCCCCACTCAGTTTTGGCTCGCATATCTTCTCAGCGTCGCAGCCATCATCTCCTCCAGTCAATGCTTCCAGTGTGATAATGATCCTTCTACTTGGAGCTACATCAATGATCATGTTCATTTTCATATAGGACAGAGGTATGCTTCACTTGGGATATATGATGTGGCTATCAAGCATATGATGGAAATCTTGGCCTGCAGTCACCAGTCCAAGGCAACACAGGAATTATTTCTTAGTGACTTTCTTCAAATTATGAAGGCTTTCCCTGATGCCTTGTTCCATCAATTACTTGTGGCCATGGCTCATCCAGACGTGAAACACAAATTGGAGCACATAGTGTCTTCTCTATGGTGCTTATGA 1005 0.4587 MDSKPPLKYQTWFLKVSIHCDGCTRKVKKVLQSIDGVFTTIIDQQQQKVTVTGSVTVETLLSKLLRAGKHAEIWPENISVKENKNKSNTHKLENDNHSYAGKTTQNCNKVMSTSSNIKPGQNSPEKSPAGDRESPQEHKGGQSGGGGSAKKKKKKSQGDVSVDHGSAGAPAPADTGFGTNQAQAPVLFVSSELQHTGATCSSVCPHHRRTSLSPFIPTQFWLAYLLSVAAIISSSQCFQCDNDPSTWSYINDHVHFHIGQRYASLGIYDVAIKHMMEILACSHQSKATQELFLSDFLQIMKAFPDALFHQLLVAMAHPDVKHKLEHIVSSLWCL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01157 334 Gene3D - 8 73 - -
Aip04g01157 334 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3-LIKE 5 180 - -
Aip04g01157 334 MobiDBLite consensus disorder prediction 82 97 - -
Aip04g01157 334 MobiDBLite consensus disorder prediction 82 177 - -
Aip04g01157 334 CDD HMA 14 72 IPR006121 GO:0046872
Aip04g01157 334 MobiDBLite consensus disorder prediction 98 129 - -
Aip04g01157 334 Pfam Heavy-metal-associated domain 16 67 IPR006121 GO:0046872
Aip04g01157 334 SUPERFAMILY HMA, heavy metal-associated domain 8 75 IPR036163 GO:0046872
Aip04g01157 334 ProSiteProfiles Heavy-metal-associated domain profile. 17 73 IPR006121 GO:0046872
Aip04g01157 334 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 5 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01157 Aip-Chr4 17974991 17979246 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01157 - - aip:107629560 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01157 04 17974991 17979246 Aip04g01157 04 17974991 17979246 ECH
Aip01g02808 01 129754567 129756435 Aip04g01157 04 17974991 17979246 PCT