Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02808 ATGGGGACTAAATTGACCGAGACATGGTTCTTGAAGGTTTCCATACACTGTGAAGGTTGCAGAAGGAAAGTAAAGAAAGTTCTACGCAACATTGATGGTGTTTTCACTACAACAATTGATCCCCAACAGCAGAAGGTTACAGTGACGGGAAGTGTTGGTGTTGAGACTCTCATAAGGAAACTGATCAAAGCTGGGAAGCACGCTGAGATTTGGCCGGAAAATGGCGCCGGAAAGGACGGGAAACCGAAGAAGAGGAACGAACAACAAAGAGAAGCAGAAGGCGTGGAGAACCACCATCGTTCCCCTGCAAATGCTGAATCAAACTCTGTCTCTGCCAAAAACAGGGGAATTGAAAATGCAGACAACTCAAGCAACAACAACAAGAAGACCAGCGAGTCCAAAACCGGCGGCAAAAAGTCGCCGGAGAAGTCTTCGGGAGGTGGTGCCTCACCACCAGAGCAAGAGAAGAAGGGTAAGAAGGGTGGTGGTGTTGAAGGTGAAGGTGAAGGTGAAGGTGAAGGGGATTCAGTGAAGAAGAATAAGAAGAAGAAAAAGAAGGTTCAGAGTAGTGGAATTGAAAAGAATGGGTCGAGTTCAGCATCATCAAGCGGTGCAGGTGCACACAGTGGATCAGGAGAGGGAATGGGGCAGATGAATCTGAGCCCTACACGTCAGCAAGAATGGGCATATGCGTATCCAGAATCAGAATCTTACTACTACCCAGGAGCAGGACCTTTGGTGTACCTAGCAACATATAACAGATTTTGTCCCATGGCCATGCATGGCAAAATGGGTGGTGGTCCTTCTTACTATGTTTCACCATTGCCCTACATCTCTGCAGGTCTTGACCATGACCCTTACCACTTTCAATCTCCACCGTTGGTTCCCTTTGAGATCTTCAGTGATGACAATGCTAATGCCTGTTCTCTTATGTGA 936 0.4722 MGTKLTETWFLKVSIHCEGCRRKVKKVLRNIDGVFTTTIDPQQQKVTVTGSVGVETLIRKLIKAGKHAEIWPENGAGKDGKPKKRNEQQREAEGVENHHRSPANAESNSVSAKNRGIENADNSSNNNKKTSESKTGGKKSPEKSSGGGASPPEQEKKGKKGGGVEGEGEGEGEGDSVKKNKKKKKKVQSSGIEKNGSSSASSSGAGAHSGSGEGMGQMNLSPTRQQEWAYAYPESESYYYPGAGPLVYLATYNRFCPMAMHGKMGGGPSYYVSPLPYISAGLDHDPYHFQSPPLVPFEIFSDDNANACSLM 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02808 311 MobiDBLite consensus disorder prediction 153 178 - -
Aip01g02808 311 MobiDBLite consensus disorder prediction 101 131 - -
Aip01g02808 311 Gene3D - 4 70 - -
Aip01g02808 311 SUPERFAMILY HMA, heavy metal-associated domain 5 72 IPR036163 GO:0046872
Aip01g02808 311 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 7 311 - -
Aip01g02808 311 MobiDBLite consensus disorder prediction 191 219 - -
Aip01g02808 311 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 7 311 - -
Aip01g02808 311 MobiDBLite consensus disorder prediction 69 100 - -
Aip01g02808 311 CDD HMA 11 69 IPR006121 GO:0046872
Aip01g02808 311 Pfam Heavy-metal-associated domain 13 67 IPR006121 GO:0046872
Aip01g02808 311 MobiDBLite consensus disorder prediction 69 219 - -
Aip01g02808 311 ProSiteProfiles Heavy-metal-associated domain profile. 14 70 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02808 Aip-Chr1 129754567 129756435 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02808 - - mtr:MTR_4g119820 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02808 01 129754567 129756435 Aip04g01157 04 17974991 17979246 PCT