Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01148 ATGGGTATCATGACCACCACTCACCGCAAGCGCACCCAAGAATGCATGAACTTCCCCCATTTTCAATCCCACCAGATTCCCCAATCTCCCATTCCCTCTATTTCTCATACTAAGCGACCTAAATTATCACCTTCAATTATACCCACACCTACTCCCGCCACCCGACCCATTTCCACCGCCACCACCGCCACTGGTAACCGGATCTCCCGGTACCCTGAGCCCAAGGGGCCCTTCCGCAGGGAGGTTCACGCTCCTTGCAGGCCCAATAAATTCGTTTTTTCGGGCTCCAGGGCTGCTAGGGTTACCGCATATTCGCATCGGAACGACGAGCACATCGGTGACGACGACACCGACGACGGCATGGGAAACTTTTTGGCGCGAAGCTACGGGATTGTGAAGCAAGCGCTGTATGATTTCACTGGGAAGGGGAAGAAGGAGGTGGTGGAATTGGACGCTGATGAGCGCGGGCAGGACGAGGCTTCGGAGGATTTGAGCGTTCGGGAGGTTGAGAATGTCGAAATTGGGGGTGAAGGGAGGTCGCTGGTGGCGGACAAGAGGTGGATTGGGAATGATGCAGTTGTGGTTGAGGTGCCGGAGGTGGAATTCGTAGATGCTAGGGCTGGGGACGGGAGGAAGTCAACGTCGACGGTGGTGGATTCGGAGTTGACTAATAGTGGTTTGAAGATGGTGGAAAATGATGCTGCAGGGATGGGTTTGGCTGCTCTGATCCGTGAGCATGAGCAGAACCCTGAAAATGTTCATCTTTATAAGAAGTTGCTTCTGGCAGCTGGCAGAAGAGACGACAAACTCGGGTGGCTGAGCTTTGAAATTGAGCGGAACGAGAAAAAGATAGCTGGATTCGAATTGTTGCGGCCGAAGAAGGCAGAACCAGTTGAGGAAGTACCACGTGAACCATTTCTCGCACTTACAGAGGAAGAGGAAGATGAGGTTGCAAGTGCCTTTTTAGCCAACCGAAGGAAGATCTTGGTTACACACGATGAATCCAACATTGAGATAAGTGGAGAAAAGTTTCAGTGCCTTAGGCCAGGTGCATGGTTGAACGATGAGGTGATAAATTTGTACCTTGAGTTGCTGAAAGAGAGGGAGAAAAGAGACCCACAGAGGTTTCTTAAATGCCATTTTTTCAATACATTTTTCTACAAAAAGCTAATAAGTGGCAGGAGTGGTTATGATTTCAAATCTGTCAGAAGATGGACCAGCCAAAGGAAATTAGGATATGGTCTAATTGAATGTGATAAAATTTTTGTGCCTATACATAAAGAGATCCACTGGTGCTTGGCTATTATCAATAAGAAAGATCAGAAATTCCAGTATCTTGACTCATTGAAAGGAATGGACAACCAAGTGCTGAAAGTACTGGCTAGATATTATGTGGACGAGGTGAAGGACAAGACCGGTAAAGACCTAGATGTGAGTTCTTGGGAAAAAGAATTCGTTGAAGACCTTCCTGAGCAAGAGAATGGGTATGATTGTGGGGTGTTTATGATCAAATATGCCGACTTCTATAGTAGAGGCCTGGGGCTGTGTTTTAACCAGGAACATATGCCCTACTTCCGCCAGAGAACAGCTAAGGAGATCTTGAGATTGAGAGCTGAATAA 1620 0.4796 MGIMTTTHRKRTQECMNFPHFQSHQIPQSPIPSISHTKRPKLSPSIIPTPTPATRPISTATTATGNRISRYPEPKGPFRREVHAPCRPNKFVFSGSRAARVTAYSHRNDEHIGDDDTDDGMGNFLARSYGIVKQALYDFTGKGKKEVVELDADERGQDEASEDLSVREVENVEIGGEGRSLVADKRWIGNDAVVVEVPEVEFVDARAGDGRKSTSTVVDSELTNSGLKMVENDAAGMGLAALIREHEQNPENVHLYKKLLLAAGRRDDKLGWLSFEIERNEKKIAGFELLRPKKAEPVEEVPREPFLALTEEEEDEVASAFLANRRKILVTHDESNIEISGEKFQCLRPGAWLNDEVINLYLELLKEREKRDPQRFLKCHFFNTFFYKKLISGRSGYDFKSVRRWTSQRKLGYGLIECDKIFVPIHKEIHWCLAIINKKDQKFQYLDSLKGMDNQVLKVLARYYVDEVKDKTGKDLDVSSWEKEFVEDLPEQENGYDCGVFMIKYADFYSRGLGLCFNQEHMPYFRQRTAKEILRLRAE 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01148 539 MobiDBLite consensus disorder prediction 22 59 - -
Aip04g01148 539 MobiDBLite consensus disorder prediction 22 44 - -
Aip04g01148 539 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 59 538 - -
Aip04g01148 539 Gene3D Adenoviral Proteinase; Chain A 296 536 - -
Aip04g01148 539 ProSiteProfiles Ubiquitin-like protease family profile. 337 509 IPR003653 GO:0006508|GO:0008234
Aip04g01148 539 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 59 538 - -
Aip04g01148 539 Pfam Ulp1 protease family, C-terminal catalytic domain 352 533 IPR003653 GO:0006508|GO:0008234
Aip04g01148 539 SUPERFAMILY Cysteine proteinases 305 537 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01148 Aip-Chr4 17567492 17572424 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01148 K08592 - jre:108994812 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02816 01 129873439 129877038 Aip04g01148 04 17567492 17572424 PCT