Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02816 ATGGGTCTCATTAGTAGTAGCAACAACAAACGGCACCAACAGTGCATGAATTTGAATCGCATGTATCCGTCTCCGAATTCCTCAGATTCCCGCACATTAAAAAGAGCTAAGTTCCAATCAACGAGCATGAACTCAACTCCTTTAAGATCATCTCCCACTAGTACTGGTTCAAGAGTTTCCCGGTACCCAAATGCAGTGCTACCGTTGCATAGGGAGGTTCACGCTCCTTGCAGATCCAAAAAGTTCGGTCTTTTGAATATTTCAGGAACTCAGAAGGAGATTGGTAAGGGTAGGGGCAATGATGCGTTGCATAACAAGTACCGCGTGTACCAGCAGGCGAAGGATTCTGCACTTGCTTGCATTCGATTATTTGAAAAGCGCAAGGAGGCGGCGCAAGTCGACACTGCTGGTCGCAACAAGGAGGTTTATGTCATAGAAGATGATGACGAAGAAGGACCATCCATTGTGACAGAACAGAGTTTGAAAGGGGATGATATGGCTTTGACTGGGATGCATGATTTTGATGCTAAGGATGTTGTAGGATTTTTGCAGCAATCAACTCCTTTGGTTTCTGAGTCCATAAATAGTAATTTGAATGTGGTTTATGCTGAGAGGACGCTGGACACTCTATCCTTGAGCCCCGAGCATCCGAAGAAGGAACCACTTGTAGAGCTGGTGTCACTGAAACCTTTTGTTCCTCTTACAAAGGAGGAAGAAGATGAGGTTGCACGTGCCTTTTCTGCTGACAGGAAGAAGGTTTTGGTCACCCATTATAAATCCAACATTGAGATCACAGGCGGAACGTTTCAGTGCCTCAGGCGGGGTGGATGGTTAAATGACAAGGTGATAGATTTGTACCTGGTACTTCTGAAAGAGAGGGAGAGAAGGAAGGCAAAGAATTCTCTCCAATGTCATTTTTTCAGTACCTTTTTCTACACAAAGTTGATAAGTGGGAAGAATGGTTATGATTTCAACTCTGTAAGGAGATGGACCAGTCAAAAGAAACTGGGATACATCCCCCATGAATGCGATAAAATATTTGTACCTATTCATCGAACGTCTCATTGGTGTTTGGCTGTCATCAATCAAAAAGAGAAAAAATTCCAGTATCTTGACTCTCTGAGAGGAACAGATACCCAAGTGCTGGAAGTGCTGGCTAGGTATTTTGTAGATGAAGTAAAGGACAAGACTGGAAAAGACACCGATGTAAGTTCTTGGGAGAAAGAATTTGTCAAAGACCATCCTAAACAATTGAATTGCTATGATTGTGGGATGTTTATGATCAAATATGCTGATTTCTACAGTAGAAATATGAGATTGTGTTTTGGCCAGGGAGACATGCCTTACTTCCGGCTTAGAACAGCTAAGGAAATCTTGAGACTAGAAGCTGACTAA 1395 0.4294 MGLISSSNNKRHQQCMNLNRMYPSPNSSDSRTLKRAKFQSTSMNSTPLRSSPTSTGSRVSRYPNAVLPLHREVHAPCRSKKFGLLNISGTQKEIGKGRGNDALHNKYRVYQQAKDSALACIRLFEKRKEAAQVDTAGRNKEVYVIEDDDEEGPSIVTEQSLKGDDMALTGMHDFDAKDVVGFLQQSTPLVSESINSNLNVVYAERTLDTLSLSPEHPKKEPLVELVSLKPFVPLTKEEEDEVARAFSADRKKVLVTHYKSNIEITGGTFQCLRRGGWLNDKVIDLYLVLLKERERRKAKNSLQCHFFSTFFYTKLISGKNGYDFNSVRRWTSQKKLGYIPHECDKIFVPIHRTSHWCLAVINQKEKKFQYLDSLRGTDTQVLEVLARYFVDEVKDKTGKDTDVSSWEKEFVKDHPKQLNCYDCGMFMIKYADFYSRNMRLCFGQGDMPYFRLRTAKEILRLEAD 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02816 464 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 198 462 - -
Aip01g02816 464 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 37 156 - -
Aip01g02816 464 ProSiteProfiles Ubiquitin-like protease family profile. 262 434 IPR003653 GO:0006508|GO:0008234
Aip01g02816 464 Gene3D Adenoviral Proteinase; Chain A 231 462 - -
Aip01g02816 464 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 198 462 - -
Aip01g02816 464 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 37 156 - -
Aip01g02816 464 SUPERFAMILY Cysteine proteinases 230 461 IPR038765 -
Aip01g02816 464 Pfam Ulp1 protease family, C-terminal catalytic domain 277 458 IPR003653 GO:0006508|GO:0008234
Aip01g02816 464 MobiDBLite consensus disorder prediction 18 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02816 Aip-Chr1 129873439 129877038 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02816 K08592 - gmx:100797013 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02816 01 129873439 129877038 Aip01g02816 01 129873439 129877038 ECH
Aip01g02816 01 129873439 129877038 Aip04g01148 04 17567492 17572424 PCT