Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01123 ATGGTTGCCGTGGAGAAAACCTCCAAGCCATACCCTACAACCGCAGAGGTAGTGGATGAGGTAAAGAGAATGGCAGACATAGGTTTCCCAATAGCAGCCATGAGCTTAGTGGGATACCTCAAGAACATGATCATGGTTGTATGCATGGGAAGGCTCGGGAGCCTCGAGTTAGCCGGTGGTGCTTTAGCCATCGGCTTCACTAATATCACCGGCTACTCCGTGCTCTCGGGCCTAGCCATAGGCATGGAGCCGCTTTGCACCCAAGCCTTCGGTTCTAGAAACTTCTCCTTGGTCTCCATCACATTGAAACGAACCATCCTAATGCTACTCCTAGCATCCCTACCCATTTCAATCTTGTGGCTAAAGCTTGAACCTTTGATGCTTTGCCTCCATCAAGATTCTGAAATAACACGAATTGCAAGCGTCTATTGCTACTATTCTATCCCTGACCTCATTGCTAATAGCTTCCTTCACCCTATACGTATTTTTCTACGTAGCAAAGGTACAACTTGGCCTCTAATGTGGTCCACTTTCTTCTCCATTCTCATACATATTCCAGTACTCGCTTTCTTCACCTTCAAACTCAACCTTGGTGTTCCCGGGATCGCGGTTTCGGCTTTTGTCGCAAATTTCAACACACTTTTGTTTCTTCTATCATACATGGTATACACAAATATCTCAAACAACAATAAAGATTCGTCGTCGTTGTCGCTTTTTTGTCCCTTGTCACAATCTCAAAAGGTTGTCCATGGTGATGCTATCTTCAATAATTCTTGTCCAACAACTTTGAGTCGCAAAGAATGGGGGATGTTGATAAGATTTTCGATACAAAGTTGTCTTGGCGTGTGTTTGGAATGGTGGTGGTACGAGCTAATGACCATTCTAGCGGGTTATCTTTATAACCCGCGTGTGGCTCTCGCAACCGCCGGCATAGTGATACAGACAACTTCGTTGATGTACACTCTGCCGATGGCGCTGAGCGCGTCCGTTTCCACTCGGGTTGGAAACGAACTGGGCGCGGGTCAACCCGAAAGGGCGAGCTTGTCCACCATGGTGGCCATAGGAATGGCACTAGCAACCTCAGTGTTGGGATTATTATGGACCACTCTAGGGAGAGAGGAATGGGGTAGGGTTTTCACAAGTGATAGTGAAGTGTTGGAACTTACAATTACGGTTTTGCCCATAATTGGATTATGTGAGATTGCAAATTGTCCACAAACAACAAGCGTTGGAATCCTTAGAGGGAGTGCTAGGCCTGGGGTTGGAGCTGGAATCAACTTCTATTCTTTCTACTTGGTTGGGGCACCCGTGGCAATTGTTTTGGGGTTTATTTGGGAATTAGGGTTTGTGGGAATGTGTTATGGACTGCTATCGGCTCAGGTGGCTTGTGTTGTTTCCATCCTTCTTGTTGTGTATAACACCGATTGGGAAATGGAGGCGTTGAAAGCCAAAAGTTTGGTTGGAATTGGTTATGGTGGTTCGCTGTCACGTGACACAAATCATCATGGTTGTCGTCGACAACACCAAACAGTCAAATGTGAAGAATGTGTTGTCTTTATCCCTCACGACGAACAGCAACAACAACAACAACCCAAACTGATTAATTGA 1608 0.4602 MVAVEKTSKPYPTTAEVVDEVKRMADIGFPIAAMSLVGYLKNMIMVVCMGRLGSLELAGGALAIGFTNITGYSVLSGLAIGMEPLCTQAFGSRNFSLVSITLKRTILMLLLASLPISILWLKLEPLMLCLHQDSEITRIASVYCYYSIPDLIANSFLHPIRIFLRSKGTTWPLMWSTFFSILIHIPVLAFFTFKLNLGVPGIAVSAFVANFNTLLFLLSYMVYTNISNNNKDSSSLSLFCPLSQSQKVVHGDAIFNNSCPTTLSRKEWGMLIRFSIQSCLGVCLEWWWYELMTILAGYLYNPRVALATAGIVIQTTSLMYTLPMALSASVSTRVGNELGAGQPERASLSTMVAIGMALATSVLGLLWTTLGREEWGRVFTSDSEVLELTITVLPIIGLCEIANCPQTTSVGILRGSARPGVGAGINFYSFYLVGAPVAIVLGFIWELGFVGMCYGLLSAQVACVVSILLVVYNTDWEMEALKAKSLVGIGYGGSLSRDTNHHGCRRQHQTVKCEECVVFIPHDEQQQQQQPKLIN 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01123 535 Pfam MatE 279 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip04g01123 535 Pfam MatE 30 187 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip04g01123 535 PANTHER MULTIDRUG RESISTANCE PROTEIN 12 492 - -
Aip04g01123 535 CDD MATE_eukaryotic 20 482 IPR045069 GO:0042910|GO:1990961
Aip04g01123 535 PANTHER PROTEIN DETOXIFICATION 55 12 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01123 Aip-Chr4 17074289 17077137 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01123 K03327 - gmx:100785533 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01123 04 17074289 17077137 Aip04g01123 04 17074289 17077137 ECH
Aip01g02825 01 130033767 130035371 Aip04g01123 04 17074289 17077137 PCT